Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g03977 | ATGGCGAATTATGGCATTCACGGCGGTCTCCTTGAAGTCACTGTTGTTAGCTGCAATAAACTGAAAGATACGGAATGGATCTCAAGGCAAGATCCTTACGTTCATATTGAATACGGTAGCAACAAATCTTCCACCCGTACCTGTAAAGATGGAGGCAAGAACCCTACATTTCAAGAGAAATTCGTGTACAGCCTAATTGAAGGACTAAGAGAGCTGAATGTTACGGTTTGGAATAGCAATACAATCACACACGATGACTTCATCGGTAGTGGAAAGATTCCATTATCAAAGGTATTTTCTCAAGGATTTGACGATAGTAGCTGGCCGTTACAAAGTAAAACTGGCAGGCATGCCGGAGAGGTTCGATTGATAATGCATTATTCCAATTCCAATTCCGTACAGAAACCTGCAAACGATTATGCTCAGAAACCATCAAAAGGTATTGCTCCATCGGCCCCACCGTATGTACCCGAGGGTGCACCCCCGCCGTCGATGTACTCTGCACCACCGCCATCTATGTACGCTGCTCATCCACCACCGTCTATGTACTCTGCACCACCACCGGCGGCTTACCCTCCACCATCTTCCTACCCCTCTTATCCACCTAATTCTGGTGTTTATCCACCGGCGCCATACCCACCTCAGGCAGCCCCTTATCCACCTCCGCCGTACCCACCAAATTCAGATTATGGATCACATTATCCCCAGGGGTCTCCATACCCAGGAATGTATCCACCACCACCATATTGA | 750 | 47.6 | MANYGIHGGLLEVTVVSCNKLKDTEWISRQDPYVHIEYGSNKSSTRTCKDGGKNPTFQEKFVYSLIEGLRELNVTVWNSNTITHDDFIGSGKIPLSKVFSQGFDDSSWPLQSKTGRHAGEVRLIMHYSNSNSVQKPANDYAQKPSKGIAPSAPPYVPEGAPPPSMYSAPPPSMYAAHPPPSMYSAPPPAAYPPPSSYPSYPPNSGVYPPAPYPPQAAPYPPPPYPPNSDYGSHYPQGSPYPGMYPPPPY | 249 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g03977 | 249 | PANTHER | CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) | 10 | 249 | IPR052981 | - | |
| Cich4g03977 | 249 | CDD | C2 | 11 | 108 | - | - | |
| Cich4g03977 | 249 | Pfam | C2 domain | 9 | 101 | IPR000008 | - | |
| Cich4g03977 | 249 | MobiDBLite | consensus disorder prediction | 217 | 249 | - | - | |
| Cich4g03977 | 249 | Gene3D | C2 domain | 8 | 129 | IPR035892 | - | |
| Cich4g03977 | 249 | ProSiteProfiles | C2 domain profile. | 1 | 109 | IPR000008 | - | |
| Cich4g03977 | 249 | SMART | C2-3c | 10 | 107 | IPR000008 | - | |
| Cich4g03977 | 249 | MobiDBLite | consensus disorder prediction | 132 | 156 | - | - | |
| Cich4g03977 | 249 | SUPERFAMILY | C2 domain (Calcium-lipid-binding domain, CaLB) | 3 | 129 | IPR035892 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g03977 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 60562 | Cich1g01603 | Cich4g03977 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr4:117497243 | Cich7g00260 | Cich-Chr7:7768376 | dispersed | |
| Cich | Cich-Chr1:32326862 | Cich4g03977 | Cich-Chr4:117497243 | wgd |