Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g03992 | ATGGAGAAAATCATATGCAGGTGTAGTGTGTTATCCAATGTGTTATTCGCGACTATCCTCATCACGGTTTTCGCTTGCAACTACGCTGCAGCACTCAAGGAAGGACAGACGTGCGTAAATAATAACAACTGTGACTCAGGGTTACATTGCGAGGCTTGCGTCGCAGACGGCAATGTTCGTCCTCGGTGTACTCGCCTTCAGCCTCTCAGCCCTTTTTCTAAGGTGAAAGGATTGCCATTCAATCGGTACTCGTGGTTGACGACGCACAATTCGTTTGCTAGATTGGGAGAAAGGTCAGATACAGGCTCTGTTGTTCTAGCTCCGACGAATCAGCAGGATTCTGTTAGTTCTCAGCTCGATAATGGTGTGAGAGGTTTGATGCTTGATATGTATGACTTTGAGAATGACATTTGGTTATGCCATTCCTTTGGTGGCAAATGCTTTAACTACACAGCTTTTCAACCTGCCATTAATGTTTTGATAGAGATTCGGGAGTTTTTGGAAAAGAATCCTACTGAAATCATCACTATAATCATTGAAGATTATGTTACATCTCAAAATGGATTAACTAATGTCTTCAACAATGCTGGTTTGAGAAAATTCTGGTTTCCAGTAGCTCGAATGCCTAACAATGGTGGCGATTGGCCCACGGTTGACTTTATGGTCAAACAAAATTTTCGGTTGGTGGTTTTCACTTCAAAAGCTGCTAAAGAACGTACAGAAGGAATCGCGTATCAATGGAAATACATGGTGGAAAACCAATATGGAACAGACGGGATGAAAAGCGGATTATGTCCAAACCGCGCGGAATCCCCCACTATGAACGTTACATCAAGGTCACTCGTTTTAATGAACTATTTTCCCGATACCCCGGATTTTACCCAAGCCTGCAAGCATAATTCGGCTCCATTAATTGACATGATGAACACATGCCATGATCTAGACCGTAAAAGGTGGCCTAATTTCATTGCTGTCGACTTCTACAAGAGGAGTAATGGCGGGGGTGCACCTGATGCTGTAGATATGGCTAATGGACAGCTAGTTTGTGGTTGTAACAGCATTTCAGTATGCAGGCCAAATATGACGTTTGGAGAGTGTAATATCCCGGCGGCAGAATCTGCTCCGGTGACCACCGGCGGAGGGAAAAGCGGGGCGGAGACGGGTGGTCAACCAGTAAGATTCGGGTGGTTGTTTGGGTCGGGTTTGGTGGCTTTGACCTTGTCTTCGTAA | 1230 | 44.88 | MEKIICRCSVLSNVLFATILITVFACNYAAALKEGQTCVNNNNCDSGLHCEACVADGNVRPRCTRLQPLSPFSKVKGLPFNRYSWLTTHNSFARLGERSDTGSVVLAPTNQQDSVSSQLDNGVRGLMLDMYDFENDIWLCHSFGGKCFNYTAFQPAINVLIEIREFLEKNPTEIITIIIEDYVTSQNGLTNVFNNAGLRKFWFPVARMPNNGGDWPTVDFMVKQNFRLVVFTSKAAKERTEGIAYQWKYMVENQYGTDGMKSGLCPNRAESPTMNVTSRSLVLMNYFPDTPDFTQACKHNSAPLIDMMNTCHDLDRKRWPNFIAVDFYKRSNGGGAPDAVDMANGQLVCGCNSISVCRPNMTFGECNIPAAESAPVTTGGGKSGAETGGQPVRFGWLFGSGLVALTLSS | 409 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g03992 | 409 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 26 | - | - | |
| Cich4g03992 | 409 | PANTHER | UNCHARACTERIZED | 41 | 357 | IPR051057 | GO:0008081(PANTHER) | |
| Cich4g03992 | 409 | SUPERFAMILY | PLC-like phosphodiesterases | 77 | 348 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cich4g03992 | 409 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 70 | 341 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cich4g03992 | 409 | ProSiteProfiles | Phosphatidylinositol-specific phospholipase X-box domain profile. | 79 | 185 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g03992 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 60572 | Cich1g01634 | Cich4g03992 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr3:145871673 | Cich4g03992 | Cich-Chr4:117835241 | dispersed | |
| Cich | Cich-Chr3:145942707 | Cich4g03992 | Cich-Chr4:117835241 | dispersed | |
| Cich | Cich-Chr5:59175207 | Cich4g03992 | Cich-Chr4:117835241 | transposed | |
| Cich | Cich-Chr6:30058174 | Cich4g03992 | Cich-Chr4:117835241 | transposed | |
| Cich | Cich-Chr1:33043033 | Cich4g03992 | Cich-Chr4:117835241 | wgd |