Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g03996	ATGGCGAATGTATCTTCTTCCTCTTCTGTTTACTCTCTTTTACCTCGCCCTTCTCCGCTCAATCGCCAGTTCGCACCTCGATCTTCCTCGTTTGCTTCCCCTCATCAAATCAATGGTTTCCCTCCTCTCTCTTTCCGCCAATCCAGAAACCCATCTCCGCTTCGAGTCCTCTCCATGCGATGCGAATCTAAAGCGACGGTGGTGTCGGGGAAATCATGGAAGACATCGGTTCTGGACAGCAAAACCCCAGTGCTGGTCGAGTTCTACGCCAGTTGGTGTGGACCATGTCAGATGGTGCACCGAGTGATTGAAGAGATCGCCGGCGAGTATGCCGGAAAGGTCAAGTGTTTTGTGCTGAACGCCGACCAAGACCCCCGGATCGCGGAGGAGTACGATATCAAGGCTGTGCCGATTGTGTTGGTGTTCAAGAATGGCGAGAAGTGTGAGTCGGTGGTTGGGACGATGCCCAAAGAGTTCTATGCGGCTGCCATTGAAAGGGTCTTGGCTTCTTCATCGTGA	519	52.79	MANVSSSSSVYSLLPRPSPLNRQFAPRSSSFASPHQINGFPPLSFRQSRNPSPLRVLSMRCESKATVVSGKSWKTSVLDSKTPVLVEFYASWCGPCQMVHRVIEEIAGEYAGKVKCFVLNADQDPRIAEEYDIKAVPIVLVFKNGEKCESVVGTMPKEFYAAAIERVLASSS	172

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g03996	172	Pfam	Thioredoxin	67	164	IPR013766	-
	Cich4g03996	172	Gene3D	Glutaredoxin	66	171	-	-
	Cich4g03996	172	SUPERFAMILY	Thioredoxin-like	60	169	IPR036249	-
	Cich4g03996	172	PRINTS	Thioredoxin family signature	92	101	-	-
	Cich4g03996	172	PRINTS	Thioredoxin family signature	84	92	-	-
	Cich4g03996	172	PRINTS	Thioredoxin family signature	132	143	-	-
	Cich4g03996	172	FunFam	Thioredoxin	60	171	-	-
	Cich4g03996	172	ProSiteProfiles	Thioredoxin domain profile.	54	169	IPR013766	-
	Cich4g03996	172	CDD	TRX-family	76	165	-	-
	Cich4g03996	172	ProSitePatterns	Thioredoxin family active site.	85	103	IPR017937	-
	Cich4g03996	172	PANTHER	GEO12009P1	59	168	-	GO:0005737(PANTHER)\|GO:0015035(PANTHER)
	Cich4g03996	172	NCBIfam	thioredoxin	70	166	IPR005746	GO:0015035(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g03996	K03671	thioredoxin

Event-related genes

Select	Gene_1	Gene_2	Event_name
	60573	Cich1g01640	Cich4g03996

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr1:37682281	Cich4g03996	Cich-Chr4:117886335	dispersed
	Cich	Cich-Chr4:117886335	Cich6g00157	Cich-Chr6:1969418	dispersed
	Cich	Cich-Chr1:22590997	Cich4g03996	Cich-Chr4:117886335	transposed
	Cich	Cich-Chr6:27004949	Cich4g03996	Cich-Chr4:117886335	transposed
	Cich	Cich-Chr8:32381005	Cich4g03996	Cich-Chr4:117886335	transposed
	Cich	Cich-Chr1:33083183	Cich4g03996	Cich-Chr4:117886335	wgd