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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04000 ATGACAGACTCTAAACAACCTGCTAAGCTTTTGTTTAAACAACTCTCGTGGTCTCCGGACATCAACCGCGACATAGAATGGCAGAAGCTCAAGATCAACCAGCGCCGTCGATTCCGCCACCGCCGCAGCAAGAGCATTGACGCTACTTCTGAAGTTGACGTTACTGACGACGATGTGAAGGAGCTTAAAGCGTGCTTTGATCTAGGTTTCGGTTTTGATACGTCTAGCGATTTGGATCCGAAACTTTCGCAAGCTTTTCCCGCTCTAGAATTATACGCCGCCGTTAACCGCCAGTACAATAGCAGACTCCTGTCAAGGTCCTCGTCGCTAAGTTCTGATTCGTCTTCATCCTCATCAAGTCCGATCACCACAATTATCGATCCAAGTGATGATCCGGAAAAGGTGAAGACGAAATTGAAACAGTGGGCGCAAGTGGTTTCATGTTCTATTCTGGAAGCTTCTTCTCACAATAACAGAAACTAA 483 46.58 MTDSKQPAKLLFKQLSWSPDINRDIEWQKLKINQRRRFRHRRSKSIDATSEVDVTDDDVKELKACFDLGFGFDTSSDLDPKLSQAFPALELYAAVNRQYNSRLLSRSSSLSSDSSSSSSSPITTIIDPSDDPEKVKTKLKQWAQVVSCSILEASSHNNRN 160
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04000 160 MobiDBLite consensus disorder prediction 107 126 - -
Cich4g04000 160 Pfam Protein of unknown function (DUF1685) 54 112 IPR012881 -
Cich4g04000 160 PANTHER OSJNBA0071G03.3 PROTEIN 9 151 - -
Cich4g04000 160 MobiDBLite consensus disorder prediction 107 133 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04000 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:117980079 Cich6g02094 Cich-Chr6:29879282 dispersed