Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04063 | ATGGCTCCTGCAAAGCCAAGCGCTCGGGCGATCTCGCAACAAGCATTCGATGAAATGGTTAAGGAAAACATAGACGATCTAGGTATGGAACCAACGGAAGCCCTAAGCGATGCCATCGAAACCCTTACTCTTCAAGGCGTAGATCTGTCTGGTATCGTCACCTCTACACTCCCTGGAGAAACCAATCCCGTGATCCAATCTCTTGACAGAATCAAACAATTACAGAGTTCGGATTGGACAGACGAAACAGTCTTAGAGGAGGCGCTAGATTTGTTCGATAATTTGACCGCTTTGTCCCGTATCGAAGGATCCGGAAATGCTGCGATTGCTACGAGAAACGGAGGTATAGAATTAATGTGCTCTGTTTGTTCGAAGCTTAGCGAATTTCGCCGTGATTCTGCACTTGCATCGGCTTTGAATGCATTGGCTGCATTTCCTCACGATATTCAAAGTACAGAAACCTTCCGGCAAAGTGGAGGACCAAAACTCGTGATTGGAACCCTAACTGACAAAACTCAAAGTACAAACATCTTAAACAGTGCCTTCTCTGTTGTTGCTGCTTCTGCAACTGGTAATGAGGTTCTCAAAGAATCATATGTGGAGTTACACATAGACGAATTAATACTTAAAATCATGAAGAACCATACAAAAGGAAACATCCCCAGTTTATATGACACCATTCGAGTCCTTCTAGCAGCTGATGATAACCGTGTAGTCGCTTCACAAGTTTACGGGTATGCTCGAAGATTTGCTAAAATTGGAATCACTGAAGCTCTTGTGGACTCACTCAATGAAGGACTTAACTCATCAAGTCTTGTATCAATAACAATTGCACTAAAAGCAATTGCAGTGAATGATGAAATATGCAGATCTGTTGCTGAAAAAGGTGGAATAGATTCTTTACTCATTTGCATCGATGAATCTGGTATACAAGGGAACAAAACTGTCGCCAAATCTTGCTGCTCTTTATTATCAAAGTTGGCAGGAAGTGACTTTAACAAAAGTGCTATAATAGAAAGAAAAGGTTTGAATAGACTCATTACACTTTCTAGTAGACTTGGTGATGATCCTTCTGTTATCCAAGAAGTGATGTCCATCATATGCACCCTGTGCCTGCGGTCACCGGATAATGCTGCCATGGCCATGGAAGCTGGAGCAGGGGAGCTTGCTATTCAATCCATGAAGAAGTTTCCGGAAGCTTCTCAGTTGCAGAAAAATTCTTGTCTCATGATTCGTAATCTTGTGGCTAGAAATACAGAAAACAGGTCGATTTTGTTGAGTAATGGTATTGAGAAGGTGATAAGGAATGCTAAAGAGAGTCATAAATGTTGTAAAGATGCGGGGACCGCTGCGCTTAGAGACTTGGGGCTTGAAAATTACAACTTGTAG | 1389 | 42.19 | MAPAKPSARAISQQAFDEMVKENIDDLGMEPTEALSDAIETLTLQGVDLSGIVTSTLPGETNPVIQSLDRIKQLQSSDWTDETVLEEALDLFDNLTALSRIEGSGNAAIATRNGGIELMCSVCSKLSEFRRDSALASALNALAAFPHDIQSTETFRQSGGPKLVIGTLTDKTQSTNILNSAFSVVAASATGNEVLKESYVELHIDELILKIMKNHTKGNIPSLYDTIRVLLAADDNRVVASQVYGYARRFAKIGITEALVDSLNEGLNSSSLVSITIALKAIAVNDEICRSVAEKGGIDSLLICIDESGIQGNKTVAKSCCSLLSKLAGSDFNKSAIIERKGLNRLITLSSRLGDDPSVIQEVMSIICTLCLRSPDNAAMAMEAGAGELAIQSMKKFPEASQLQKNSCLMIRNLVARNTENRSILLSNGIEKVIRNAKESHKCCKDAGTAALRDLGLENYNL | 462 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04063 | 462 | SUPERFAMILY | ARM repeat | 136 | 455 | IPR016024 | - | |
| Cich4g04063 | 462 | Gene3D | - | 33 | 240 | IPR011989 | - | |
| Cich4g04063 | 462 | Gene3D | - | 241 | 461 | IPR011989 | - | |
| Cich4g04063 | 462 | PANTHER | UNCHARACTERIZED | 6 | 456 | - | - | |
| Cich4g04063 | 462 | SMART | arm-5 | 374 | 416 | IPR000225 | GO:0005515(InterPro) | |
| Cich4g04063 | 462 | SMART | arm-5 | 330 | 372 | IPR000225 | GO:0005515(InterPro) | |
| Cich4g04063 | 462 | SMART | arm-5 | 285 | 329 | IPR000225 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04063 | K24166 | armadillo repeat-containing protein 6 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr4:119182588 | Cich8g00044 | Cich-Chr8:1548039 | dispersed |