Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04079	ATGGTTGCCGTGAAAATGATGTTTCCGACGATAATGATGGCCACGGTGATCGCCGTTCGTTCATTAGATACAAACCAGGTTTTCGATCCATGTTCAGATTCAAAAGTTCGGAGATGGGATGGATTTACCTTCGGACTCGCATTTTCTTCCAAGGATTCCTTCTTCTCCAAACAAATTCAGCTTTCACCCTGCGACAGCCGCCTCTCCCTCTGTGGAAACGCGAAACTCGCCGTCTTCCGCCCAAAAGTCGACGAACTCACTGTCCTCACGATCAAGACCACCGACTTTGATCCGACGAAAGATGGTGGATATATGGTCGCATTTGCCGGAAAACAATACGCAGCAAGATCGATACCTGCTTTAGTCGCTGATAAATCAAACATCATCACAAGTTTCACTCTGGTACTTGAATTCCAAGAAGGCAGACTTATAAACTTATACTGGAAGAAATTTGGGTGTAAATCGTGTGCAGAGAAATCAAGTGTTTGCCTGAACAATCAAGAATGTGCTACACCAATTTCGAAGTGTAAGACCAATGTCGACTGCAATCTTAAAGTGCAATTAGCGTTTTCGGGTACAGATAAGGCGTTAGGTGTTCTTAACTCATGGTACGAGGTGAAAAAGCTTCGAGAATATTCGTTGGGTGGTATGAAATTGTTCAGAATATTAACATATATTAATGCCAGAAAACGGAGGGGTCATGGTCCATTTTGGCCCTCAAAACGTTCCGCTGCTGATTGCACAAACTCGTTCTCGTTCTTTCGCCCCGCTCTCCCTCTTCCATGGCGGATCAAACCAAACGGCTACAGCAACGTCGCCACAAGAAATCCCACAAACTCTCGTTTTCATGATCCCAAAATTTTGGATTACGAGTTCGATCATGCCCTCAATCGAATCATTTTCGCGTCAGGCTCATTACAATTCACATTCATCACAATCTACTGTCTCCCCGCATTTGATCTGATCGAGGAAGCAAAGCTTCGTACTGTATGGTGGGCTATATGTATTTTCGCTGTCACATACTTTTTAACCCATACCAGTAAATCGATGTGGATGAATGTTCCTATAGCAATTCTTCTGGTATCCGGCGCTCACATTCTATTAACCGAAGTGGATTTCCATTGGAAGACCAGGAAATCAGGCCGACGTTCATATCTATCACACTTAGAGAAAAAACAATTATCTGTGAATGATTCTCGTCTTAACACCTTGCCTCCTCCACCTAAATGGAAACGGAAGATAGATTCTCCAGTAGTCGAGGCTGCCATGGATGATTTCACTAACAAGATTTTGCAAGAATTTGTGCTTGATTTGTGGTATTCAGACATAACACCTGACAAAGAAGCTCCAGAGCTCATACATGCCATTATCATGGATATTCTTGCTGAAATCTCCATGAGAGTCAAAGACATAAACCTTGTTGACATGCTAACAAGGGATGTTGTTGACCTAGTAGGAGATCACTTAGAACTATTCAGGAAAAACCAAGCTTCTATTGGGAGAGAAGTTATGGTGACATTATCTTCTGAAGAAAGAGATGAAAGATTAAAACATCATCTCATGGCTTCAAACGAACTTCATCCAGCTTTAATATCTCCCGAGAGTGAGTACAAGTTTCTTAAACGGATTATGGGAGCACTTTTGGCTGCAGTACTTAGACCACGTGAAGCTCAATGCCCTTTAGTTAGATGCGTTACAAGAGAGCTTTTAACATGCTTGATAATGGAACCTGTAATGAGATTTGCAAGCCCAGGGCGTATAAATGAGTTGATTGAAGGTATTTTTCTTGCAACAAATAAGGGTGAAAAAGAGGGAAGTGATGATCAATCTAATGTCACAGATCAAATTCAACCCCAAAATCAATCTTCTAGTACAACTACAAACAATGAAAAAGGTCAAGAGTTAACTTCTTTTAACACCGGATCTTCTTGTAGTCAAAATAGTGAAAAGACATCAACTACCCCTAACACCCAAAAGGAAACAACTTCCACCGTGGCAAGTGGGCCCACCCAAGATGAATCAATGCATACACGGACATCCGATTGGGCCCGTGTTCTAGAAGCAGCAACCCAAAGAAGAACAGAAGTTCTTCAACCAGAAAATCTTGAAAACATGTGGACAAAAGGAAGAAATTACATGAAAAAATCCCAAAAGAATTCTATTATAAAAAGTGGTATGAATGAAAATTCTAGTTTTGATAGTGGGAGTGATCAGAATCTTGATGGTGGACAAAACAAGACACCAACACGTGTTAATTTTGATGAAAGTTTGAATTTTGATAGTGGAAGTGATGGGAAGTTGAAAAGGCTAAACAGTGCATCTGAGTCAAACATTCTAAGTTTGACCGAAAGTATTGCATCACCGATTCAAGTTGGTGGGACCATTATACCAGAGTTTTATAGTGCAAATGCTGGAAGAGATAGTGATGTTACAAATGTTAATGTTGGTTATGATAATAAAGTAATAAGGACTGAAGGGTATGTTCCAAAGCTTAGGTGTCGGGTTCTTGGAGCATTCTTTGAGAATATTGATTCAAAATCCTTTGCAGTCTATTCAATTGCAGTAACAGATGCTGATAACAAAACTTGGAATTTTGAAAGATTACACCGCCATCTTAAAGACATTCCCAATTACACATTACATTTGCCTCCAAAAAGAATATTCTCATCAAGTACAGAAGATGCATTTGTTCACCAAAGATGTATACAGCTTGATAAATATCTCAAAGATCTTTTGTCTATAGCTAATATCGCCGAGCAACATGAAGTTTGGGACTTTTTGAGCATGTCTTCAAAGAGATACTGTTTTGGAAGATCATCATCAGTAGTCAAAGCCTTAGCAGTCAACGTGGATGATGCTGTAGACGACATTGTACGCCAATTTAAAGGTGGATTAAAGAGAAAAATTGTGGGCCCCGGTTCCCCTTCTGAATCACCTTCTTTATCTGCAAACAGAAATGTGACATGGGACACAAATGAAGGAACCGATTCACCATTAAGGCAACCTACTTTTGATATGACAAATTTTGTTTCTGATTATGAAGAATGTGAAAAAGATAAGACAGTTAATAATGAGGAAATGGAGTCAATGGGACAAGTTTACGGGGGTAATTTCGACAATGACGTGAATTTAAGAGGAATTTCACCAAAAATTGTTAATAAGAGTGAGGAACAAAATAATAAAAATTTGGTTTCGGAAAAGAAAAATAATTCAGAGGTGCGGTCTGAAGTACTTAACTTGGCTGCAAAGCTATACTATAAATGGGATGAAGTTTAG	3276	39.65	MVAVKMMFPTIMMATVIAVRSLDTNQVFDPCSDSKVRRWDGFTFGLAFSSKDSFFSKQIQLSPCDSRLSLCGNAKLAVFRPKVDELTVLTIKTTDFDPTKDGGYMVAFAGKQYAARSIPALVADKSNIITSFTLVLEFQEGRLINLYWKKFGCKSCAEKSSVCLNNQECATPISKCKTNVDCNLKVQLAFSGTDKALGVLNSWYEVKKLREYSLGGMKLFRILTYINARKRRGHGPFWPSKRSAADCTNSFSFFRPALPLPWRIKPNGYSNVATRNPTNSRFHDPKILDYEFDHALNRIIFASGSLQFTFITIYCLPAFDLIEEAKLRTVWWAICIFAVTYFLTHTSKSMWMNVPIAILLVSGAHILLTEVDFHWKTRKSGRRSYLSHLEKKQLSVNDSRLNTLPPPPKWKRKIDSPVVEAAMDDFTNKILQEFVLDLWYSDITPDKEAPELIHAIIMDILAEISMRVKDINLVDMLTRDVVDLVGDHLELFRKNQASIGREVMVTLSSEERDERLKHHLMASNELHPALISPESEYKFLKRIMGALLAAVLRPREAQCPLVRCVTRELLTCLIMEPVMRFASPGRINELIEGIFLATNKGEKEGSDDQSNVTDQIQPQNQSSSTTTNNEKGQELTSFNTGSSCSQNSEKTSTTPNTQKETTSTVASGPTQDESMHTRTSDWARVLEAATQRRTEVLQPENLENMWTKGRNYMKKSQKNSIIKSGMNENSSFDSGSDQNLDGGQNKTPTRVNFDESLNFDSGSDGKLKRLNSASESNILSLTESIASPIQVGGTIIPEFYSANAGRDSDVTNVNVGYDNKVIRTEGYVPKLRCRVLGAFFENIDSKSFAVYSIAVTDADNKTWNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLKDLLSIANIAEQHEVWDFLSMSSKRYCFGRSSSVVKALAVNVDDAVDDIVRQFKGGLKRKIVGPGSPSESPSLSANRNVTWDTNEGTDSPLRQPTFDMTNFVSDYEECEKDKTVNNEEMESMGQVYGGNFDNDVNLRGISPKIVNKSEEQNNKNLVSEKKNNSEVRSEVLNLAAKLYYKWDEV	1091

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04079	1091	PANTHER	PX SERINE-THREONINE KINASE PXK	320	1061	IPR051837	-
	Cich4g04079	1091	MobiDBLite	consensus disorder prediction	601	678	-	-
	Cich4g04079	1091	Pfam	PXA domain	416	592	IPR003114	-
	Cich4g04079	1091	Gene3D	-	835	935	IPR036871	GO:0035091(InterPro)
	Cich4g04079	1091	Pfam	PX domain	865	928	IPR001683	GO:0035091(InterPro)
	Cich4g04079	1091	ProSiteProfiles	PXA domain profile.	416	599	IPR003114	-
	Cich4g04079	1091	MobiDBLite	consensus disorder prediction	724	758	-	-
	Cich4g04079	1091	ProSiteProfiles	PX domain profile.	829	934	IPR001683	GO:0035091(InterPro)
	Cich4g04079	1091	MobiDBLite	consensus disorder prediction	610	676	-	-
	Cich4g04079	1091	SUPERFAMILY	PX domain	831	931	IPR036871	GO:0035091(InterPro)
	Cich4g04079	1091	SMART	PXA-3	416	599	IPR003114	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04079	K17925	sorting nexin-13

Event-related genes

Select	Gene_1	Gene_2	Event_name
	60587	Cich1g01689	Cich4g04079

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr1:33834924	Cich4g04079	Cich-Chr4:119438937	dispersed
	Cich	Cich-Chr4:119438937	Cich5g01983	Cich-Chr5:32482218	dispersed
	Cich	Cich-Chr4:119423639	Cich4g04079	Cich-Chr4:119438937	tandem