AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04080 ATGGCATCTGCCTCAGCGTCCGCCATTCTATCTCCGGTCAACTTCACGGTGGTCGCTCCCAGCCGCTCTTCCGGGAGAACCACCGCCACCAAAGTGTCCTACATCAAGGGACTCAACTCATTCGGCGGCCTTAAAGCCCACAACACCGTCGCTGCATTGGGACTCCCTGTTTCCACCGAACAGCAATTCGCAAACTTTGTTTGCTCATTGAAGAAACCATCATCCAAGAATCTCGCCGGCGGCGGTGGAGCACTCACCTCCACGTGCAATGCTGTCGCTGAGATTTTCAAGATAGCAGCAATCATGAATGGACTTACTCTTGTTGGAGTTGCAGTTGGCTTTGTTCTACTCCGAATCGAAGCAGCTGTTGAAGAAGCAGAGTAA 384 52.34 MASASASAILSPVNFTVVAPSRSSGRTTATKVSYIKGLNSFGGLKAHNTVAALGLPVSTEQQFANFVCSLKKPSSKNLAGGGGALTSTCNAVAEIFKIAAIMNGLTLVGVAVGFVLLRIEAAVEEAE 127
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04080 127 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 127 IPR053333 -
Cich4g04080 127 Pfam PetM family of cytochrome b6f complex subunit 7 94 120 IPR012595 GO:0009512(InterPro)
Cich4g04080 127 Hamap Cytochrome b6-f complex subunit 7 [petM]. 91 123 IPR012595 GO:0009512(InterPro)
Cich4g04080 127 SUPERFAMILY PetM subunit of the cytochrome b6f complex 92 124 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04080 - -