Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04095 | ATGGATGACGTACCAGGATCCATGGGGACAAGTGCTGGTTTTGCCTTGAGACTTGGACAAACCATTTTTTCATCTGCTTCTCTTCTCTTCATGGCGTATGGTGTTCAGTTTTACAGCTATTCATCTTTCTGTTTCTTGGTGACAATCATGGGTTTGGTTATTCCATGGAGTTTCACATTGGCACTGCTTGATGGATACTCGGTTCTTGTAACATGCCCAGTTCGGCAAAAGGGTATACTGGTGATTATCGTTATTGGAGATTGGATGTTGTCGACTTTAACACTAGGTGCGGCTTCTTCAGGTGCTAGTGTGGTGGATATCTTGATGAGGGCGGATGGGTCTTTTTGCCCTTCGAATATATGTAGCCGATATCTTCTGTCGACCGTATTTGCTTTCTTGTCGTGGTTCTTATCCATGGGTTCTTCCTTGTTCAATCTATGGCTTCTTCCATCTTTGTGA | 459 | 43.79 | MDDVPGSMGTSAGFALRLGQTIFSSASLLFMAYGVQFYSYSSFCFLVTIMGLVIPWSFTLALLDGYSVLVTCPVRQKGILVIIVIGDWMLSTLTLGAASSGASVVDILMRADGSFCPSNICSRYLLSTVFAFLSWFLSMGSSLFNLWLLPSL | 152 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04095 | 152 | PANTHER | CASP-LIKE PROTEIN 5B3 | 1 | 151 | IPR045009 | GO:0016020(PANTHER) | |
| Cich4g04095 | 152 | Pfam | Casparian strip membrane protein domain | 8 | 137 | IPR006702 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04095 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr4:120242846 | Cich8g01410 | Cich-Chr8:42121143 | dispersed | |
| Cich | Cich-Chr2:105170704 | Cich4g04095 | Cich-Chr4:120242846 | transposed | |
| Cich | Cich-Chr3:142030789 | Cich4g04095 | Cich-Chr4:120242846 | wgd |