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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04098 ATGAAATACACCGAACTTTCCCATTTCAGCCACCCTCAACACCGGCTCAAACCGGGCTACACCGAGGTCCCGTTCAAGTGTGATGGATGCAAGGAAGTTGGCATAGGTTCCAACTACAAATGCACAACATGCAATTACGATTTGCACGTCCATTGTGCCCTTCCTACCCCTTCCATCACCCATCCTTTCTACACCAAGTGCTCATTCCAGTTCTTGACCCGCCCACCGGGGTCTATAGCCAGATACTGCAACGCATGCGAGAAAGCAGTGACAGGATTTGTTTACCATTGCAAGTTGTGCAGGTTCGACCTTCACCCATGTTGCGCGAAGCTTCCAACTATGTTGGATGATGGACAGGTGGAACTGTACCTGTATAGAAAGGTAGGGTCCGCCTGCCACAGATGTGGCAGGAAAGGACGCAGTTGGAGTTATAGGTCCACGTGCAAGAAGTACAATTTGCACGTGGCTTGTGTAAAGGAGATGTTGGTGGAGAGTTGGCATGAGATATATTTTGGTAGGAGTGGGTTGAAGGGTGATCTTAGTGGTGATTTGTATGGGCAAAGTGGGAAATTTGAGACAAGAATTCCAAGTTTGAAAGGTACATTAGAAAGCTATCATCATAATCACCAAAGCAAAGGGAAAGTGAAGAAGTGTTGTGAAATGGCTGGCTTGGCTATGCAGTTTGTGATATCAGCCGTTCTTGGTGATCCCACCACTCTAATTGCTGGTGTTGTTGGTTCTTTAATGTCCAAATAA 756 46.69 MKYTELSHFSHPQHRLKPGYTEVPFKCDGCKEVGIGSNYKCTTCNYDLHVHCALPTPSITHPFYTKCSFQFLTRPPGSIARYCNACEKAVTGFVYHCKLCRFDLHPCCAKLPTMLDDGQVELYLYRKVGSACHRCGRKGRSWSYRSTCKKYNLHVACVKEMLVESWHEIYFGRSGLKGDLSGDLYGQSGKFETRIPSLKGTLESYHHNHQSKGKVKKCCEMAGLAMQFVISAVLGDPTTLIAGVVGSLMSK 251
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04098 251 PANTHER CYSTEINE-HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 249 - -
Cich4g04098 251 Gene3D - 12 58 - -
Cich4g04098 251 ProSiteProfiles Zinc finger phorbol-ester-DAG-type profile. 13 67 IPR002219 -
Cich4g04098 251 SUPERFAMILY Cysteine-rich domain 30 114 IPR046349 -
Cich4g04098 251 Pfam C1 domain 72 109 IPR004146 -
Cich4g04098 251 Pfam C1 domain 9 53 IPR004146 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04098 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
60589 Cich1g01701 Cich4g04098
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr1:33990079 Cich4g04098 Cich-Chr4:120339291 wgd