Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04102 | ATGGATGAAACGGAGAACCCGGCGGAAGCCAAGAGAACCACCGTCGGGCCGCCATCCGTGCTGGAGTACCTGGACCCCAACTACTGGAACGACAGGTTCACTTCCGAGGATCATTACGAATGGCTTAAAGATTACTCCCATTTTCGTCATCTCATTCAGCAACATATCAAACCTTCATCTTCTGTATTGGAGCTAGGATGTGGAAACTCACAACTGTCTGACGAGTTATATAAAGAAGGAATCACCAAGCTAACCTGCATCGACTTATCTTCAGTTGCAGTCGAGAAGAAGAAGAAACAGTTGTTATCAAAAGGCTACAAAGATATTAAAGTGTTGGAAGGCGACATGTTGAATCTTTCATTTCCTGATGAGTCGTTCGATGTTGTTATAGAGAAAGGAACAATGGATGTTTTGTTCGTGGACAGTGGCGACCCATGGAACCCAAAGCCCGAGACTGTAAACAAAGCAATGTCAATGCTTCAAGGTGTTCATAGAGTTTTGAAACCGGATGGGATTTTTATTTCAATCGCTTTTGGTCAGCCACATTTCAGACGGCCGTTATTCAATGCTCCTGAGTTTACATGGTCAATTGAGTACACTACATTTGGGGATGGATTTCACTATTTCTTTTATATCTTGAGGAAGGGATGTAGATTGTTGGAGATGAATGAAGTGAAGAAGGTTGATGCACCTTGTCTTGACCTTTTTCAAGATGAATTGGATAATGAAGATTACTTGTTTCGGACCAATATTGATGACGTGGATGATGATAGTTGA | 777 | 42.08 | MDETENPAEAKRTTVGPPSVLEYLDPNYWNDRFTSEDHYEWLKDYSHFRHLIQQHIKPSSSVLELGCGNSQLSDELYKEGITKLTCIDLSSVAVEKKKKQLLSKGYKDIKVLEGDMLNLSFPDESFDVVIEKGTMDVLFVDSGDPWNPKPETVNKAMSMLQGVHRVLKPDGIFISIAFGQPHFRRPLFNAPEFTWSIEYTTFGDGFHYFFYILRKGCRLLEMNEVKKVDAPCLDLFQDELDNEDYLFRTNIDDVDDDS | 258 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04102 | 258 | Gene3D | Vaccinia Virus protein VP39 | 21 | 229 | IPR029063 | - | |
| Cich4g04102 | 258 | Pfam | Methyltransferase domain | 57 | 177 | IPR025714 | - | |
| Cich4g04102 | 258 | FunFam | EEF1A lysine methyltransferase 4 | 21 | 231 | - | - | |
| Cich4g04102 | 258 | CDD | AdoMet-MTases | 62 | 178 | - | - | |
| Cich4g04102 | 258 | PANTHER | SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN | 15 | 216 | IPR051419 | - | |
| Cich4g04102 | 258 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 20 | 248 | IPR029063 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04102 | K22857 | EEF1A lysine methyltransferase 4 [EC:2.1.1.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr4:120446208 | Cich5g03308 | Cich-Chr5:74916803 | transposed | |
| Cich | Cich-Chr4:120446208 | Cich5g02667 | Cich-Chr5:55381461 | transposed |