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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04108 ATGTCAATCCTAGGTTCAAATATTCCGAGCGAGGTTGGCCTTCGGTTGCTTCTTTGCCCACTTGGATCCAACATTGTCCTGAAAACAGCATGCTGCTCTGTGGGAGTTATTTTACCTGTTTACTCTACATTTAAAGCAATTGAAACAAATAACACATCTGATCAACAAAAATGGCTTTTATACTGGGCAGCATATGGGAGTTTTAGCGTTGCAGAAATATTTGCAGACAAAATTATATCATGGTTTCCACTTTACCATCACATGAAGTTTGCTTTTCTTGTTTGGCTTCAACTTCCCACCACCAATGGTGCTAAACATTTATACATGAGGCATTTACGTCCTTTCCTTTTAAGACATCAAGCCAACCTTGATCAAATTGTGGGAATTGTCTACAATGAAACAGGTAAATTCATTAGTGCTCACCAAGGAGAATTCCGGTTCATGAAGGCAATTGCCATGAAGATTCTAATATCAGCAAAGCATTTTATCAATGATAGTAGTCAACCTATTCCACCGGTCCCACCACCAGAGGGAAGAGCAATCAGAAGCTTAAGTGACGAAATAGATACATCTGATGATGATGATGATGATTATGTAAATGTGCCTGCAACTTAA 615 38.86 MSILGSNIPSEVGLRLLLCPLGSNIVLKTACCSVGVILPVYSTFKAIETNNTSDQQKWLLYWAAYGSFSVAEIFADKIISWFPLYHHMKFAFLVWLQLPTTNGAKHLYMRHLRPFLLRHQANLDQIVGIVYNETGKFISAHQGEFRFMKAIAMKILISAKHFINDSSQPIPPVPPPEGRAIRSLSDEIDTSDDDDDDYVNVPAT 204
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04108 204 PANTHER HVA22-LIKE PROTEINS 35 129 IPR004345 -
Cich4g04108 204 MobiDBLite consensus disorder prediction 166 204 - -
Cich4g04108 204 MobiDBLite consensus disorder prediction 188 204 - -
Cich4g04108 204 Pfam TB2-DP1, HVA22 family 39 115 IPR004345 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04108 K17279 receptor expression-enhancing protein 5/6
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:120556485 Cich5g02001 Cich-Chr5:32769812 transposed