Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04167	ATGGCGAAACGATCGGTTGCTGCATATGCAATCCTTGTGCTCCTCTTCGTTCTTGCCATCTCAGAAATCGCGACGGTAAAAGGAAAATTGTGTGAAAAAGTGAGCCAGACTTGGTCTGGAAAGTGTGAAGACAAGAAGTGTGACAAAAAGTGTATTGGATGGGAGAAAGCACTCCATGGAGCTTGTCACAAGCGTGAAGGGAAAGCCGGTTGCTTCTGCTACTTCGACTGTGCAAAGAAACCTCCAAAGGATGCTAAACCCGCTCCTCCCGATGCCTTACCCCCTCCTCCTGCAGGTGGAGGAGGTGGATCTCCTCCTCCTGCTGATGGCGGTGGTTCCCCTCCTCCTGCCGACGGCGGCGGATCCCCTCCTCCTGCCGACGGCGGCGGATCACCTCCTCCTTCCCAACACTAA	414	54.35	MAKRSVAAYAILVLLFVLAISEIATVKGKLCEKVSQTWSGKCEDKKCDKKCIGWEKALHGACHKREGKAGCFCYFDCAKKPPKDAKPAPPDALPPPPAGGGGGSPPPADGGGSPPPADGGGSPPPADGGGSPPPSQH	137

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04167	137	SMART	gth-4	30	77	IPR003614	GO:0006952(InterPro)
	Cich4g04167	137	Gene3D	-	27	77	IPR036574	-
	Cich4g04167	137	MobiDBLite	consensus disorder prediction	82	137	-	-
	Cich4g04167	137	PANTHER	DEFENSIN-LIKE PROTEIN 1	1	77	-	GO:0006952(PANTHER)
	Cich4g04167	137	Pfam	Gamma-thionin family	29	77	-	-
	Cich4g04167	137	MobiDBLite	consensus disorder prediction	87	137	-	-
	Cich4g04167	137	SUPERFAMILY	Scorpion toxin-like	29	77	IPR036574	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04167	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr4:122001806	Cich4g04169	Cich-Chr4:122039933	dispersed
	Cich	Cich-Chr4:121880771	Cich4g04167	Cich-Chr4:122001806	proximal
	Cich	Cich-Chr4:122001806	Cich4g04168	Cich-Chr4:122006772	tandem

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cich7g03093	.	8	77	Plant Defensins gene family	AT2G02130	55.844	1.97e-25	88.2
	Cich4g04158	.	1	77	Plant Defensins gene family	AT1G19610	45.455	2.22e-21	79.3
	Cich4g04166	.	22	78	Plant Defensins gene family	AT1G19610	50.877	6.06e-17	68.9
	Cich4g04167	.	3	78	Plant Defensins gene family	AT1G19610	40.789	1.76e-18	72.8
	Cich4g04168	.	3	78	Plant Defensins gene family	AT1G19610	42.105	1.79e-18	73.9
	Cich4g04169	.	35	78	Plant Defensins gene family	AT1G19610	56.818	1.87e-12	56.6
	Cich4g04170	.	20	77	Plant Defensins gene family	AT1G19610	41.379	6.42e-10	50.4
	Cich2g00751	.	1	77	Plant Defensins gene family	AT2G02100	64.935	1.09e-31	103.0