AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04171 ATGAATTCTATTGATCTCAAATTGGAAAAGGCAACCGCGATGTTTCGATACCGCAGGCTTCACAGTCTCACAACTCTGTTTCGATGCATGGAGATGTTATTCTTTTTCATTCTAATTTCTAGGTTTTCCTCTCAACTACCGTTCGCCATTAGAGTCTCTACTGATCATTTCAGAGGAATTTCTTTTGCGATTTTTAGCCCTAGGTTTGTTTTTGTGATTGGAAACGTAATTATCTTAATACTGTTATTCAAATCTCGAGTTATTGAAAATGGAGATTGCAATGAAAAACTCGATGTTTACGACGAGTTTGTTAAGAAATGTGGGAAGAGCAGAGTAAATACCACCAGCCTTTCAACCATTGCTACTACTGATATCGTTCCGAGTAAGAAAAGGAAGATTTGCAGGAGTCAGTCGGAGAATCTAATGATCGTGAATTGTAAGGACAATCAAACTCACCAGAAACTAAGGCGGTCGGTGACGGCAAGACACATATCGAAGAAGGTTGATGTTGGTGGCGGTGAGGCTGTACAGGAGAAACGTTGCACGGCGGATGAACTGAGCGGAGAAGAGTTCCGGCGAATAGTGGAGGCATTTATTGCGAGGCAACAACAATCCCTACGTGATGAAGAGCTGACTCAGGTAGCATATATAGCTGTATAA 660 41.52 MNSIDLKLEKATAMFRYRRLHSLTTLFRCMEMLFFFILISRFSSQLPFAIRVSTDHFRGISFAIFSPRFVFVIGNVIILILLFKSRVIENGDCNEKLDVYDEFVKKCGKSRVNTTSLSTIATTDIVPSKKRKICRSQSENLMIVNCKDNQTHQKLRRSVTARHISKKVDVGGGEAVQEKRCTADELSGEEFRRIVEAFIARQQQSLRDEELTQVAYIAV 219
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04171 219 PANTHER TRANSMEMBRANE PROTEIN 5 212 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04171 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
62999 Cich4g04171 Cich7g00330
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:122199037 Cich4g04950 Cich-Chr4:140623877 dispersed
Cich Cich-Chr4:122199037 Cich7g00330 Cich-Chr7:9909496 wgd