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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04197	ATGGATCACCGGTTTTTTCTCCTCCTTTCATTTTCTCTTCTCGCCGTTACCTCGTTGGTCTCCGGTGGCAATGCCAGCCCTGTTTCCGGAGACGATGTCTTCATCCGTCAGGTGGTCGACGACGGAGCCCAGTCGTTGAATACGGAGGAGGATCACTTCCGTGCCTTCAAGCGAAAGTTCGGTAAATCGTACGCGTCACAGGAAGAGCACGATTACAGGTTCACTGTCTTCAAAACTAACCTCCGCCGCGCAAAGCGTCACCAGAAGCTTGATCCGTCGGCGGTCCATGGCGTCACCCGATTCTCCGACATGTCGTCATCGGAATTTCGAAAGCATCTCGGACTGAGATCTCGTCTCAGGATCCCCGCCGACGCCAGCGAGGCTCCGATCCTTCCAACGACCGATCTTCCCGATGATTTTGATTGGAGAGATCATGGTGCAGTGACTGATGTGAAGAATCAGGGTTCGTGTGGATCGTGCTGGTCGTTTAGTACAACCGGAGCACTAGAAGGTGCCAATTTCCTTGCGACAGGGAAGCTTGAAAGCCTAAGTGAACAGCAACTTATTGATTGTGACCATGAGTGTGATCCAGAAGAAAAAGATTCATGTGATTCGGGGTGTGATGGAGGTCTCATGAATAGTGCCTTCGAGTACACTCTCAAAGCTGGTGGGCTTATGAGGGAAGAAGACTATCCTTACACGGCCACAGACGGACAAAAGTGCAAATTTGATAAAAACAAGATTGTAGCATCTGTGAGTAACTTCAGTGTAGTATCCCTTGATGAAGACCAAATTGCTGCTAATCTCGTGAAACATGGTCCTCTTGCTGTGGCTATCAATGCGGTCTACATGCAGACATACATCGGTGGAGTATCATGCCCATACGTATGCTCAAAACGGTTAGACCATGGTGTGCTAATGGTCGGTTACGGTGCATCCGGTTACTCCCCAATAAGAAGGAAGGAAAAACCATACTGGATCATAAAGAACTCATGGGGACCAAATTGGGGTGAACATGGATACTACAAAATTTGCAAAGGTCCTAATATTTGCGGTGTCGATTCCATGGTCTCAACAGTTGTTGCGGTTAACCGACATAATACTTAA	1107	48.42	MDHRFFLLLSFSLLAVTSLVSGGNASPVSGDDVFIRQVVDDGAQSLNTEEDHFRAFKRKFGKSYASQEEHDYRFTVFKTNLRRAKRHQKLDPSAVHGVTRFSDMSSSEFRKHLGLRSRLRIPADASEAPILPTTDLPDDFDWRDHGAVTDVKNQGSCGSCWSFSTTGALEGANFLATGKLESLSEQQLIDCDHECDPEEKDSCDSGCDGGLMNSAFEYTLKAGGLMREEDYPYTATDGQKCKFDKNKIVASVSNFSVVSLDEDQIAANLVKHGPLAVAINAVYMQTYIGGVSCPYVCSKRLDHGVLMVGYGASGYSPIRRKEKPYWIIKNSWGPNWGEHGYYKICKGPNICGVDSMVSTVVAVNRHNT	368

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04197	368	ProSitePatterns	Eukaryotic thiol (cysteine) proteases asparagine active site.	325	344	IPR025661	-
	Cich4g04197	368	SUPERFAMILY	Cysteine proteinases	51	361	IPR038765	-
	Cich4g04197	368	ProSitePatterns	Eukaryotic thiol (cysteine) proteases cysteine active site.	154	165	IPR000169	-
	Cich4g04197	368	Gene3D	Cysteine proteinases	34	362	-	-
	Cich4g04197	368	FunFam	Cysteine protease RD19A	33	361	-	-
	Cich4g04197	368	Pfam	Papain family cysteine protease	136	360	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Cich4g04197	368	SMART	Inhibitor-I29-2	53	109	IPR013201	-
	Cich4g04197	368	PRINTS	Papain cysteine protease (C1) family signature	325	331	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Cich4g04197	368	PRINTS	Papain cysteine protease (C1) family signature	154	169	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Cich4g04197	368	PRINTS	Papain cysteine protease (C1) family signature	303	313	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Cich4g04197	368	Pfam	Cathepsin propeptide inhibitor domain (I29)	53	109	IPR013201	-
	Cich4g04197	368	CDD	Peptidase-C1A	137	360	IPR039417	-
	Cich4g04197	368	ProSitePatterns	Eukaryotic thiol (cysteine) proteases histidine active site.	301	311	IPR025660	-
	Cich4g04197	368	PANTHER	CYSTEINE PROTEASE FAMILY C1-RELATED	52	353	IPR013128	GO:0004197(PANTHER)\|GO:0005615(PANTHER)\|GO:0005764(PANTHER)\|GO:0008234(InterPro)\|GO:0051603(PANTHER)
	Cich4g04197	368	SMART	pept-c1	136	361	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04197	K01373	cathepsin F [EC:3.4.22.41]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr1:65231584	Cich4g04197	Cich-Chr4:122678722	dispersed
	Cich	Cich-Chr3:70743330	Cich4g04197	Cich-Chr4:122678722	dispersed
	Cich	Cich-Chr4:6774083	Cich4g04197	Cich-Chr4:122678722	dispersed
	Cich	Cich-Chr4:6792317	Cich4g04197	Cich-Chr4:122678722	dispersed
	Cich	Cich-Chr4:122678722	Cich6g04244	Cich-Chr6:120571244	dispersed
	Cich	Cich-Chr4:122678722	Cich3g04004	Cich-Chr3:80947942	transposed