Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04205 | ATGACTCAAATTAGCAGAAAAATGTATCAATTAAACCTCAAGAGAACGATTATCTGGCGTTTAGCTCTTCTCCGGCGATGTGCTAGATCTCTCTGGCACCAAATTCTTGCTTGTTGGATCGGAAAGTCTGTCCGGTACCGGCAATTGTTACACACCGGCCCTTTGATTCCGACGTCTCATCGGCGTTCTTCTCCGACGGAGACTACGACAACGACGATCGACATGGCCACCGTGTGCCACCAGTTTCCATCCGAAGAACTGACGGCCTCTAGCGGCGAAATGTCGTCGTCCTCCGGCGGCTCCGATCATGATCAAGATGCTTCCGATTTGGTGGCTTTGAAGATTAGTCTGTTGGGTGATCATCATATCGGAAAAACAAGCTTCTTGTCGAAGTACGTTGGAAAAGAAAAGAATCAAGAAGAATTACAAAAGAAAGGCATAAATCACATGGATAAAATACTGTGTGTTAAAGGAGCCAGAATTTCCTACACAATTTGGGAAGTCGGCTGTGATGCATTTTGCCCAGATGGTGATTTAAGAACATCAATTCCTGCTGCTTGTAAAGACTCGGTAGCTATTTTGTTCATGTTCGATCTAACGAGTCGTTGTACACTTAATAGTGTTATCAATTGGCATCAACAAGCTAGGACTTATAATCAGACCGCTATTCCGGTGATGGTTGGGAGCAAATTTGATGAATTCGTGAAGCTTCCATTAGATTTACAGTGGACGATCGCAAACCAGGCAAGAGCGTATGCAAAGGCTATAAATGCAACGTTATTCTTCTCAAGTGCATCTTACAATATAAACGTAAATAAAATCTTCAAATTCGTAACTGCGAAGCTTTTTGACTTGCCATGGACTTTGGAACGAAATCTTACAATTGGCGAGCCGATTATTGACTTTTAA | 909 | 42.79 | MTQISRKMYQLNLKRTIIWRLALLRRCARSLWHQILACWIGKSVRYRQLLHTGPLIPTSHRRSSPTETTTTTIDMATVCHQFPSEELTASSGEMSSSSGGSDHDQDASDLVALKISLLGDHHIGKTSFLSKYVGKEKNQEELQKKGINHMDKILCVKGARISYTIWEVGCDAFCPDGDLRTSIPAACKDSVAILFMFDLTSRCTLNSVINWHQQARTYNQTAIPVMVGSKFDEFVKLPLDLQWTIANQARAYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLPWTLERNLTIGEPIIDF | 302 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04205 | 302 | PANTHER | - | 111 | 301 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) | |
| Cich4g04205 | 302 | Gene3D | - | 101 | 291 | IPR027417 | - | |
| Cich4g04205 | 302 | ProSiteProfiles | small GTPase Rab1 family profile. | 104 | 302 | - | - | |
| Cich4g04205 | 302 | SMART | rab-sub-5 | 113 | 285 | - | - | |
| Cich4g04205 | 302 | FunFam | Septum-promoting GTP-binding protein 1 | 103 | 292 | - | - | |
| Cich4g04205 | 302 | Pfam | Ras family | 114 | 281 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Cich4g04205 | 302 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 113 | 294 | IPR027417 | - | |
| Cich4g04205 | 302 | PRINTS | Transforming protein P21 ras signature | 220 | 233 | - | - | |
| Cich4g04205 | 302 | PRINTS | Transforming protein P21 ras signature | 260 | 282 | - | - | |
| Cich4g04205 | 302 | PRINTS | Transforming protein P21 ras signature | 113 | 134 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04205 | K07976 | Rab family, other |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr4:122964983 | Cich9g00105 | Cich-Chr9:3044167 | dispersed |