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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04229 ATGATTTACCTGTTCTTCGCGGTTTTGCTTGTCGAAATGTTGACGATTCTGTTACTTTTATTCAAAACCCCGCTCCGAAAACTTTTGATAATTGGGTTAGATCGTGCGAAACGAGGTAGAGCTCCGTTGGTTGTAAAATCCGTCACCGCCACCTTCTTCGTTATGATGATGTACAACGTTTACAGCGTAATGGAAATTAAGAGACGCCCCGCCGACGTCAATAATCCCACCGATCAAATCATCCTCGCTTACCACATGCTCGAAGCTTCTCTCATGGGATTCTCGCTTTTTCTAACACTTATGATAGACCGACTCCACCACTACATTCGCGAGCTTCGAATCCTCCGAAAAACAATGGAAACCGCGAAAAAACAAAACCGAGCAGCCGAAGAATACAAAAACAAAGGGGCGGATGAAGTGAAACAATTAAACGAAGAAATGTTAAAAATGAGGGAAAAAATGAAAAGCTTGGAATCAAAATATTCATCAATGGAAAAAGAAGTTAAATCAGCTGAAGCAAATTCACTTGCACTCAAACATCAATCTGAAGGATTCCTTCTTGAATATGACCGTTTGTTGGCTGAAAATCAGAATCTTAGAGATCAACTTCGGGCCATTGATGATAGCTTGTCTCATTCTAATGGAAAGAAGGATACGTGA 660 40.76 MIYLFFAVLLVEMLTILLLLFKTPLRKLLIIGLDRAKRGRAPLVVKSVTATFFVMMMYNVYSVMEIKRRPADVNNPTDQIILAYHMLEASLMGFSLFLTLMIDRLHHYIRELRILRKTMETAKKQNRAAEEYKNKGADEVKQLNEEMLKMREKMKSLESKYSSMEKEVKSAEANSLALKHQSEGFLLEYDRLLAENQNLRDQLRAIDDSLSHSNGKKDT 219
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04229 219 Coils Coil 105 181 - -
Cich4g04229 219 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 200 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
Cich4g04229 219 FunFam B-cell receptor-associated protein 29 136 199 - -
Cich4g04229 219 Coils Coil 189 209 - -
Cich4g04229 219 Gene3D - 136 199 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04229 K14009 B-cell receptor-associated protein 31
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Event-related genes

Select Gene_1 Gene_2 Event_name
60627 Cich1g01809 Cich4g04229
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr2:155055496 Cich4g04229 Cich-Chr4:123956797 dispersed
Cich Cich-Chr4:8644200 Cich4g04229 Cich-Chr4:123956797 dispersed
Cich Cich-Chr6:119818895 Cich4g04229 Cich-Chr4:123956797 transposed
Cich Cich-Chr1:35966348 Cich4g04229 Cich-Chr4:123956797 wgd