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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04230 ATGGTAACCTCAAAAATGACCAAACTATCCTTCATCATCATGTCACTCATATCTATTATTGCATCTTTGAAGGCCCATGAATTAGGTGAGCTCAAACGGTCCTCCATGACCCTTTACTTCCAAGACTATTTTGGTGGACCCAACGCAACCATGAAACCCGTCACCTTCTCCGCCGACGCATGGTCCTTCAAACAATTTGGGACCATCTTTTGCACTGATGACCTAATAACTGTAGCCATGGATCAGGGTTCGGCTCAAGTGGGTCGAGCCCAGGGTATCTATGTCACATCTGCATTGGATGGGTCAAATACACATGTTCTTATATCCATAGTGTTCACAAATGAGGAGTTTGGTGGTAGCACCTTGGAGGTGCAAGGGGCTAGCAAGCAGTTTGAGAAGGTGAGAGAGGTGGCGGTGGTTGGTGGCACCGGAACATTCCGGTTGGCTAGAGGTTATGCCACTTTTGAGACTGTTCATCTTGATATGTCATTATCTTACTCGGTCATTGAGGGCAATTTTACTGTGTGGCACTACTAA 537 46.18 MVTSKMTKLSFIIMSLISIIASLKAHELGELKRSSMTLYFQDYFGGPNATMKPVTFSADAWSFKQFGTIFCTDDLITVAMDQGSAQVGRAQGIYVTSALDGSNTHVLISIVFTNEEFGGSTLEVQGASKQFEKVREVAVVGGTGTFRLARGYATFETVHLDMSLSYSVIEGNFTVWHY 178
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04230 178 Pfam Dirigent-like protein 35 175 IPR004265 -
Cich4g04230 178 Gene3D - 20 172 IPR044859 -
Cich4g04230 178 PANTHER NUCLEOPORIN-RELATED 11 173 IPR004265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04230 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:123959596 Cich5g02034 Cich-Chr5:33285818 dispersed
Cich Cich-Chr4:123959596 Cich5g02031 Cich-Chr5:33253504 transposed