Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04244	ATGGCTGAAACCCTAAGCCCTAGCCGTACACCGGGCCACAAACAGAGATTGCCGGTCCTCTCCCCGGATCGACCTTTATTTTTGGGATCTAACGATGATAAGCTCGAACGTGCTCAAGCACGCGCCGCTCGTGCTGCAGCCATCCGGCGGAAGCCTGTGGCGTTGCATCAAGCAACCGATGCTAATCCTGCCGACCCTTGTCTTGGCCAAGAGCAGATTATGGAGTTGTTTCAGAACTGCATAAGACTCGCCAGTGAAAATAAAATTAATCAGAAGAACACGTGGGAGTTGAATCTGATAGATCACCTTTGCGACATTATTAAGGTCGAAGAAGAGAATGATGTGGAGACCAATTTTCAGAAGGCAAGCTGCACACTTGAAGCTGGAGTTAGAATATACTCAATGAGAGTGGATTCAGTTCATTCCGAGGCATACAAAGTTCTTGGAGGAATTAGTCGAGTTGCACAAGACGCTGAAGATTCTGTAGAGGATGACAACACTGAAAACATGCCAGGAGAACGCACTTCCAAGAAGGAAAAGGAAATAAAGTTATCTCCTTTATCAACATTGGAATCATCTTTTGAAGCTCTTAATGTGAAGAAATTTGATGTTGCATTTGCGGTGGATCCTCTTTATCATCAAACAACTGCACAATTTGATGAAGGCGGATCAAAAGGTCTTTTACTAAATAACCTTGGAGTCTATGGTGGATGCCGAATGATATTTGATTCACTTGAAGTACCTTCAAAATGCATGTTATCTTCAAATCAACATAAAATAGACACAATTGATATCTCATTTGCCAAAGATTGTATAGAACAAATGTCAACAAACTTCTCAAAGAAACTTGAAATCTCACCAAGTTTGAAGGAAATAGTCAACATGTTTGATGAAGATAATAAAAGACCAGTGGATACATTTTCTTGTTCCCAAAAATCCATAGAACCAGATCATGAAGCTTTTGAAGGTGACTTTAATGGAGGTGAAAATGAAAATGATAACTCGGGTACATGGGATTTCATCAATGACAACCAGACAAGTTTGAATGATGATGATGACACTTATGAGGGAGATGAAGGATCTGTTCATCATGAGGAAAATGAAGCGTATGTTAGTAATGATGGTGATTTAGATGAAAAGTGTTTAAATGTTGATAGTTTCTTGTTTTTAAGTCTTGGATTAAATGGAAAACATAATGCCTGGGCTGGCCCTGAACATTGGAAGTACCGCAAGACTAAAGGTCCAGAAGACCCTTCGAAAGAAAACGGGTCACCAAAAATGGCTAAAATTAAAAAAAATAAAAAACAAGAACCCGATATAGATTTCACAAAAGCATTAGAATTAGAAACCGACTTGGATAGTATCTTTGCACCTCCTAAAAACCCTAAAACACTTTTATTACCTACAAATAGAGAACCCGCTAACACAATGCTTCCGGAAGATTGCCATTACCAACCAGAAGATCTTGTGAAACTATTTCTTCTTCCAAATGTTATGTGTCTTGGAAAAAGAGGAAGAAGGTATTCAGATGACACTAATCAAGAAGGTGAAGGAAATAATAATAATAATAATAACGAAACATTTGAATCATGGGACAATGATTTTGGCCAATTTGATGATGGAAATGCTTATAGTGATAACGAAGACTCCACCACACTCGTCTCTCAACCCCGCCAGGTAAAGAAGATTGAAGTAGAATATGACAGAACATCAAAACAAGTCGATGTTCAAGCTCTTAAAGAAATCCTTTGGTCATCTATTCAAGAAACACATCTTTCACTTTCACCTCAAGAAACAAAGACAAAGACATTGTCTTTCAAGGAAATGTTGGCGAGTTTTCCGACTGATTCGAAGAAACCCGCAAGTGCATCGATCGATGCAATTTCACCGCATTTGTGTTTTATTTGCTTATTGCATTTGGCTAATGAGCATGGATTAAGCATCCATGGTTGTGATGATTTGGATGATCTCACCATACACGTGTCCCCTAATTGA	1995	38.95	MAETLSPSRTPGHKQRLPVLSPDRPLFLGSNDDKLERAQARAARAAAIRRKPVALHQATDANPADPCLGQEQIMELFQNCIRLASENKINQKNTWELNLIDHLCDIIKVEEENDVETNFQKASCTLEAGVRIYSMRVDSVHSEAYKVLGGISRVAQDAEDSVEDDNTENMPGERTSKKEKEIKLSPLSTLESSFEALNVKKFDVAFAVDPLYHQTTAQFDEGGSKGLLLNNLGVYGGCRMIFDSLEVPSKCMLSSNQHKIDTIDISFAKDCIEQMSTNFSKKLEISPSLKEIVNMFDEDNKRPVDTFSCSQKSIEPDHEAFEGDFNGGENENDNSGTWDFINDNQTSLNDDDDTYEGDEGSVHHEENEAYVSNDGDLDEKCLNVDSFLFLSLGLNGKHNAWAGPEHWKYRKTKGPEDPSKENGSPKMAKIKKNKKQEPDIDFTKALELETDLDSIFAPPKNPKTLLLPTNREPANTMLPEDCHYQPEDLVKLFLLPNVMCLGKRGRRYSDDTNQEGEGNNNNNNNETFESWDNDFGQFDDGNAYSDNEDSTTLVSQPRQVKKIEVEYDRTSKQVDVQALKEILWSSIQETHLSLSPQETKTKTLSFKEMLASFPTDSKKPASASIDAISPHLCFICLLHLANEHGLSIHGCDDLDDLTIHVSPN	664

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04244	664	MobiDBLite	consensus disorder prediction	508	533	-	-
	Cich4g04244	664	PANTHER	CONDENSIN COMPLEX SUBUNIT 2	14	662	IPR022816	GO:0000796(InterPro)\|GO:0000799(PANTHER)\|GO:0003682(PANTHER)\|GO:0007076(PANTHER)\|GO:0007076(InterPro)
	Cich4g04244	664	MobiDBLite	consensus disorder prediction	318	337	-	-
	Cich4g04244	664	PIRSF	Condensin-H	530	664	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)
	Cich4g04244	664	PIRSF	Condensin-H	4	550	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)
	Cich4g04244	664	MobiDBLite	consensus disorder prediction	1	23	-	-
	Cich4g04244	664	MobiDBLite	consensus disorder prediction	342	361	-	-
	Cich4g04244	664	MobiDBLite	consensus disorder prediction	514	532	-	-
	Cich4g04244	664	MobiDBLite	consensus disorder prediction	409	436	-	-
	Cich4g04244	664	Pfam	Condensin complex subunit 2	28	542	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)
	Cich4g04244	664	Pfam	Condensin complex subunit 2	519	660	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04244	K06676	condensin complex subunit 2

Event-related genes

Select	Gene_1	Gene_2	Event_name
	63010	Cich4g04244	Cich7g00367

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr1:655494	Cich4g04244	Cich-Chr4:124433299	dispersed
	Cich	Cich-Chr4:124433299	Cich7g00367	Cich-Chr7:10829078	wgd