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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04247 ATGGACGAAGTGATCACCATAGCCGATGCGGCGTACCGCGCAAGCAAGGCGACGGAGACGGCGGCGACTCCTTCATCTTCAGCTCAGGTCCTCTCCTACAGTGTGCCACTGTTGTCAGCCTTCCTTGCTTTTGCCATTGCTCAATTCCTTAAGGTCATCACCACCTGGTATAAGGAAAGAAAATGGGATCCTAAAAAGATTGTTGGCTCAGGTGGAATGCCATCATCTCATTCTTCAACTGTAGTGGCACTTGCAGTATCCATAGGTCTACATGAAGGAGTTGAATCATCAACATTTGCCATTGCTGTTGTCTTGGCTTTAATTGTTATGTATGATGCGACTGGAGTCAGACTCCATGCTGGTCGCCAAGCAGAAGTGTTGAACCAAATTGTTTGTGAATTTCCACCAGAGCACCCTCTGTCAACATCCAGACCTCTTCGTGATTCTCTTGGGCATACTCCTTTACAGGTGGTTGCAGGGGCGGTATTAGGATGCATGGTGGCATTTGTGATGAAAGCATCTGAATAA 528 47.54 MDEVITIADAAYRASKATETAATPSSSAQVLSYSVPLLSAFLAFAIAQFLKVITTWYKERKWDPKKIVGSGGMPSSHSSTVVALAVSIGLHEGVESSTFAIAVVLALIVMYDATGVRLHAGRQAEVLNQIVCEFPPEHPLSTSRPLRDSLGHTPLQVVAGAVLGCMVAFVMKASE 175
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04247 175 Pfam Divergent PAP2 family 36 167 IPR003832 -
Cich4g04247 175 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 8 173 IPR003832 -
Cich4g04247 175 CDD PAP2-like 37 170 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04247 K09775 uncharacterized protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr3:1549026 Cich4g04247 Cich-Chr4:124444951 dispersed
Cich Cich-Chr4:124444951 Cich9g00079 Cich-Chr9:2540878 dispersed
Cich Cich-Chr4:124444951 Cich8g00288 Cich-Chr8:7205265 transposed