Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04249	ATGGATTTTGAGTTGAGAAGAGCAAGAGAGAAATTGGAGAAAGAGCAGAAGGACAGGAAAGAGAAGGCGAGGCAAAGATTAGAAAGGGAGAGAAAAGCCAAACAAGAAGCTCATCGTCAGCGTGAGGCGATCGAGGCTTCTCAGAGAGCTCGTAGAATCGATGCCATGGAAGCCCAACTTAAGGCTGATCAACAGATGGAAGAAAACATACTCATCGGAAGAGGAATTTCTTTCAATCGTGTTCTTGAAGCTGTACCATTCGAGGGTCCCGGAGACAAAATCAAACTTCCGCCTTCCTGTTTCAACGAATTATCCGGCGAAGGTGCTTTCGAGAAAGGCCCCCTCCATTTCCAACTATCGGTACATCACCAAAACAACTCTCCACCATCTGAAACCGTAACAACCCACGCCGGTGTCCTGGAATTCACTGCCGACGAAGGTACGGTTACCATCCCTCCTCACATCTGGAACAACCTTTACTCCAAAAAAGACCCAATTACCCCTCTAATCGAAGTAAAATACGTATGGCTCCCAAAAGGAACATACGCAAAACTCCAATCACAAGAACTCGGATTCTCAGACATACCCAACCACAAAGCAGTCCTCGAAACATCCCTTCGCCAACACGCTACCCTTTCACAAAACGACATTTTAACAGTCAAACACGGTGTGTTGACTTACCATCTCCATGTCCTCGACCTTAAACCTTCCCAAAGCATATCCGTTCTTGAAACCGACATAGAAGTCGACATCGTGGGTCCCGATTCACTTCCCGAAAACAACACCCAAAACGTTCTAAAACCACTAACATTTGGAAAACCTGAGTCAGGCGTTATAAACGAAGGAGAATATATTTATTACAAATTCTCAATAGATAATGAAAATTGGGGAAGAATTTCATCTGGGTATGCTGAAATTGAAGTAAAGCTAGATTCTTTAGATGGTGACACGGATCTTTATCTTTCAAAACACCCACTTTTGTTCCCGAATACACATCAGCACGGTTGGTCTTCACACGACATGGGTTCAAAAAATCTAGTTCTTGGATCAAAAGATCACAATTTGGGTACGGGTGGTTATAGTGTTGGTGTGTATGGATTCAAAGGTACCTCAAAGTACAATGTTATAGTAAGCATTCAAGATACTTCAAACACAAAGGTCGGTCAACATGGTCAAGAAAGTCAACAACAAAGTCAAGAAAGTGTATCGTCTTCTTTATCGGTGGATACTGTGGAGTGTGGGAATTGTAAGCATTATATACCGTTGAGGACTATCGGGCTTCATGAGGCGTATTGTAGGAGACATAATGTTGTTTGTAAACATGACGGTTGTGGGGTTGTTCTTAGAGTTGAAGAGGCTAAAAATCATGTGCATTGTGAGAAATGTGAGTTGGCTTTTCATTGCCGTGAGATTGAAAAACATATGAAAGTGTTCCATGAGCCGTTACTTTGTGCTTGCGGTGTCACCCTCGAAAAGACACAAATGGTGGAACATCAGGCGTCAGAGTGTCCGTTACGTCTTGTGATATGTAGATTTTGTGGGGATATGGTGCAAGCGGGTTCAATTGCGGTTGATACGCGTGATCGGTTAAGAGGACTTTCAGAGCATGAAAGTCAATGTGGGTCAAGGACTGCCCCGTGTGATTCATGTGGGCGGGCGGTTATGTTGAAAGAAATGGATATTCATCAAATAGCTGTTCATCAAAAGAATTGA	1713	43.26	MDFELRRAREKLEKEQKDRKEKARQRLERERKAKQEAHRQREAIEASQRARRIDAMEAQLKADQQMEENILIGRGISFNRVLEAVPFEGPGDKIKLPPSCFNELSGEGAFEKGPLHFQLSVHHQNNSPPSETVTTHAGVLEFTADEGTVTIPPHIWNNLYSKKDPITPLIEVKYVWLPKGTYAKLQSQELGFSDIPNHKAVLETSLRQHATLSQNDILTVKHGVLTYHLHVLDLKPSQSISVLETDIEVDIVGPDSLPENNTQNVLKPLTFGKPESGVINEGEYIYYKFSIDNENWGRISSGYAEIEVKLDSLDGDTDLYLSKHPLLFPNTHQHGWSSHDMGSKNLVLGSKDHNLGTGGYSVGVYGFKGTSKYNVIVSIQDTSNTKVGQHGQESQQQSQESVSSSLSVDTVECGNCKHYIPLRTIGLHEAYCRRHNVVCKHDGCGVVLRVEEAKNHVHCEKCELAFHCREIEKHMKVFHEPLLCACGVTLEKTQMVEHQASECPLRLVICRFCGDMVQAGSIAVDTRDRLRGLSEHESQCGSRTAPCDSCGRAVMLKEMDIHQIAVHQKN	570

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04249	570	Gene3D	-	78	177	IPR042299	-
	Cich4g04249	570	Coils	Coil	5	47	-	-
	Cich4g04249	570	Gene3D	-	179	252	-	-
	Cich4g04249	570	Gene3D	-	275	385	-	-
	Cich4g04249	570	Pfam	Ubiquitin fusion degradation protein UFD1	91	254	IPR004854	GO:0006511(InterPro)
	Cich4g04249	570	Pfam	TRAFD1-XAF1, zinc finger	533	562	IPR049439	-
	Cich4g04249	570	MobiDBLite	consensus disorder prediction	1	50	-	-
	Cich4g04249	570	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	478	530	IPR013083	-
	Cich4g04249	570	PANTHER	UBIQUITIN FUSION DEGRADATON PROTEIN 1	1	541	IPR004854	GO:0006511(InterPro)\|GO:0030433(PANTHER)\|GO:0031593(PANTHER)\|GO:0034098(PANTHER)\|GO:0071712(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04249	K14016	ubiquitin fusion degradation protein 1

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr4:124465579	Cich2g02909	Cich-Chr2:113948010	transposed