Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04252	ATGAAACCTTGTGTAGAATTCATCGACTTCAACTCAATGGCGTCTTCTTCATCTTCATGGTGGCAGTCGCTCTTCTCTCCGGCCAAAAATTCCTATACCGCTCATTGCTTCAAACGCCTCCAGGAATACGCGATTAAAGCCAAAGTTAAGGTGATAAGATCATCACAAGAAGATAAATCATTATCAAGTCTCAAAGAAATGGAGAAGATCATAGGCTATAAGTTCAAGCAAAAGCTTCTATTGCAACAAGCTTTTACACATCCAAGTTATAAAGATGCCGAATCCTATGAAAGACTGGAATACGTTGGTGATTCCATTCTGAATTTTCTAGTCAGCAAACAACAATTCTTCATGTACCCAAATCTCCCACCAGGTTCATTAACTGCTCTCAGGGCTGCAAATGTTGACACTGAAAAACTGGCACGCATAGCAGTTAAATATAACTTCCATAAGTATATCCGACATGAAAATCCAAAGCTTAGTAAGCAGATTCAAGTGTTTATGAGAGCTCTTGAAAAGTACCCTTTTCATTCGTATGGATTAATTGATGCTCCAAAGATTCTTGCTGATATTGTTGAATCCACAATTGGGGCCATATATGTTGACAGTAATTCTTCAATCGATACTACATGGGAGGTGACCAAGATTTTATTGGACCCCATGATTACTCCTGAAATGCTCCAACAAAATCCGGTGAGAAAACTGAATGAATTATGCCACAAAAAGAAAATGAAAATTCGATTGAGAGATAAATGGTCAAAAGAAGGTGTGTATGAAGTTTTTATTGATAATAAACTTAAAGGAAGAGGTAAATACCAAGCCAAGAAGGAAATTGCATTGAATAGAGCAGCTGAAGATGCATGTAATAACATTATGAATGATGACATGGATAATGCTAAAACCAACATAGCCGAAAGTTGA	921	37.13	MKPCVEFIDFNSMASSSSSWWQSLFSPAKNSYTAHCFKRLQEYAIKAKVKVIRSSQEDKSLSSLKEMEKIIGYKFKQKLLLQQAFTHPSYKDAESYERLEYVGDSILNFLVSKQQFFMYPNLPPGSLTALRAANVDTEKLARIAVKYNFHKYIRHENPKLSKQIQVFMRALEKYPFHSYGLIDAPKILADIVESTIGAIYVDSNSSIDTTWEVTKILLDPMITPEMLQQNPVRKLNELCHKKKMKIRLRDKWSKEGVYEVFIDNKLKGRGKYQAKKEIALNRAAEDACNNIMNDDMDNAKTNIAES	306

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04252	306	CDD	RIBOc	80	227	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Cich4g04252	306	Gene3D	-	227	303	-	-
	Cich4g04252	306	Pfam	Double-stranded RNA binding motif	231	290	IPR014720	-
	Cich4g04252	306	SUPERFAMILY	dsRNA-binding domain-like	186	291	-	-
	Cich4g04252	306	PANTHER	DICER-RELATED	49	294	-	GO:0003723(PANTHER)\|GO:0004525(PANTHER)\|GO:0005634(PANTHER)\|GO:0005737(PANTHER)\|GO:0030422(PANTHER)
	Cich4g04252	306	FunFam	Endoribonuclease dicer-like 1	58	225	-	-
	Cich4g04252	306	Pfam	Ribonuclease III domain	97	203	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Cich4g04252	306	ProSiteProfiles	Ribonuclease III family domain profile.	64	204	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Cich4g04252	306	Gene3D	Ribonuclease III domain	52	226	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Cich4g04252	306	ProSitePatterns	Ribonuclease III family signature.	97	105	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Cich4g04252	306	SUPERFAMILY	RNase III domain-like	64	224	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Cich4g04252	306	SMART	riboneu5	79	227	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04252	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	60622	Cich1g01801	Cich4g04252

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr1:35818514	Cich4g04252	Cich-Chr4:124543927	dispersed
	Cich	Cich-Chr4:124543927	Cich5g01373	Cich-Chr5:23061834	dispersed
	Cich	Cich-Chr4:124483673	Cich4g04252	Cich-Chr4:124543927	tandem