Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04272 | ATGACGATTACAACCCCCGGCTTCCCATCTCCGCCACCATTTCACCATTCGACCACCCACCCTCCTCCATACAAACACCCTCCTATCATAACTCTTCAAAACCCAGCAAAACCCCATGACAATTCCATAAAATCCCTGAAGAATTCCGGGTTTTTATCAGCAATTGGAAACGCAATTGAAGACCAAGAGTATCGGAAAGCTAGGGCTGAGGTTATCCGGAAAGGAACAGGGTTAGAGGGTTACACAATTGAGGGTCTTTCAATTGGGGGTCATGAAACTTGTGTTATCGTTCCTGAATTGAAGTGCGCATTTGATATCGGAAGGTGTCCTGCTAGAGCCGTCGCCATGAATTTCCTGTTTATTACTCACGCTCACCTTGATCACATTGGTGGGCTACCCATGTATGTAGCGACTCGTGGGTTATACAGTTTGAGTCCTCCGACTGTATTTGTCCCACCTGCCATTAAAGAAGATGTTGAAAATTTGATCGAGCTTCATAGGAAGATGGGAATGGTGGAGTTAAATCTTGATTTGGTTGCATTGGATGTAGGAGAAACATACGAGTTACGAAATGACCTTGTTGTACGCCCTTTTAAAACTCACCACGTGATACCCAGTCAGGGTTATGTTATTTACTCGGTTCGCAAGAAGCTAAAAAAGCAATATACTCATTTAAAAGGAAGGGAGATTGAGAAAAAGAAGAAATCCGGTGTTGAGATCACTGATATTATATTGTCACCGGAGGTGGCATTCACGGGAGATACAACGTCTGATTTTCTACTTGATCCAAGAAGTTCCGATGCCTTGAGGGCCAAAGTCCTTATAACCGAGGCGACGTTTTTGGACGATAAATGCGACATTGAGCATGCACGAGAGCATGGTCACATGCATATTGATGAGATTATGGAGCATGCTAAGTGGATCCGAAACAAAGCCATTCTTTTGACTCATTTTTCGTCACGCTACCATATCGAGGAAATTCGTGAAGCTGTGACAAAATTGAAGTCAAAGGTTTCAGCCAAAGTTGTTCCACTTACAGAAGGTTTTAGATCAATGTACTCATCATAG | 1068 | 43.26 | MTITTPGFPSPPPFHHSTTHPPPYKHPPIITLQNPAKPHDNSIKSLKNSGFLSAIGNAIEDQEYRKARAEVIRKGTGLEGYTIEGLSIGGHETCVIVPELKCAFDIGRCPARAVAMNFLFITHAHLDHIGGLPMYVATRGLYSLSPPTVFVPPAIKEDVENLIELHRKMGMVELNLDLVALDVGETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLKKQYTHLKGREIEKKKKSGVEITDIILSPEVAFTGDTTSDFLLDPRSSDALRAKVLITEATFLDDKCDIEHAREHGHMHIDEIMEHAKWIRNKAILLTHFSSRYHIEEIREAVTKLKSKVSAKVVPLTEGFRSMYSS | 355 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04272 | 355 | Pfam | Beta-lactamase superfamily domain | 115 | 318 | IPR001279 | - | |
| Cich4g04272 | 355 | Gene3D | - | 81 | 350 | IPR036866 | - | |
| Cich4g04272 | 355 | PANTHER | TRNASE Z TRZ1 | 41 | 349 | - | - | |
| Cich4g04272 | 355 | SUPERFAMILY | Metallo-hydrolase-oxidoreductase | 115 | 334 | IPR036866 | - | |
| Cich4g04272 | 355 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04272 | K00784 | ribonuclease Z [EC:3.1.26.11] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr3:64951247 | Cich4g04272 | Cich-Chr4:125105139 | dispersed | |
| Cich | Cich-Chr4:125105139 | Cich8g02877 | Cich-Chr8:109535131 | dispersed |