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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04308 ATGGCTATAGTCCCAAGCTCTACATCCATTCTATTTACCTCCATCTTTATTTCTCTTTTCTTCACTTCATGTTCTCAAACATGTTCAAATCACAAATTTACATCTGAAAGGTTCTTCACATCTTGCAAAGATCTTCCATATCTCAATGCTCATCTCCACTGGATATACTTCAAATCCACAAATCAATCCAAGATCGCATTTCGGGCCCCACACACTCCCAAGGGCTGGATCGCATGGGCAATCAATCCTTACAGAAGAAGCATGGTTGGATCACAAGCACTCATAGCTTTTCGTAACACTAAAGGTATGATGTCAGCATATACAACAACAATCTCAGGGTACAACCCCTCAATGCAGCCTAAAAAACTCACGTTCCATGTTTCAAAACTCTCAACGGAGTATTCAAAGAATGAGATCACCATTTTTGCGGTTGTGGGTCCACTAGCACATGGGCCGGTTGTTAACCAGGTGTGGCAAGTTGGAAGCTTGGATAAGAATGGTGTTCCTATGATGCATGAAATGGGGCTTCAAAATCTTCAATCGACAAATGTTATTGATTTTTCGTCTCTATGA 573 41.01 MAIVPSSTSILFTSIFISLFFTSCSQTCSNHKFTSERFFTSCKDLPYLNAHLHWIYFKSTNQSKIAFRAPHTPKGWIAWAINPYRRSMVGSQALIAFRNTKGMMSAYTTTISGYNPSMQPKKLTFHVSKLSTEYSKNEITIFAVVGPLAHGPVVNQVWQVGSLDKNGVPMMHEMGLQNLQSTNVIDFSSL 190
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04308 190 Pfam Protein of unknown function (DUF568) 88 187 IPR045265 -
Cich4g04308 190 CDD DOMON-CIL1-like 39 189 IPR045265 -
Cich4g04308 190 ProSiteProfiles DOMON domain profile. 48 175 IPR005018 -
Cich4g04308 190 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 10 189 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04308 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:126070355 Cich4g04309 Cich-Chr4:126071768 tandem