AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04368 ATGAAATACAGCACCAATGGTCGACCTCCAAAGTCAGATACAAATGGTCAACCGGTGAAGTCGGGTCCCAATGGTAAACCGGTAAATTTAGGCGCCAATGGTAAACCAGTAACTTTAGGCGCCAATGGTAAACCTGTAAAGTTAGCTTCCAACGGTAAACCAATCACCATGGTTCCCACCAGTGAACTTGTAAAAAACAAACCAGTGAATGGATCAACACAAGTTATTAATGGAACAAGTCTTGTTAAGAGAGAGACCAAGGCACTAGTAAAGCCTGTAAAAGTTAAAGAACCCTCAGGTTTTCTACCTCCAGAAGATTTAAAGGTCTTACCATCAGACGAAAGTTTCAGTTGGGCAAATGAAAATTATAATTCGGTTCAAAGATCAATAGATGTTTGGTCTTTTGTTCTTTCTTTACGTGTTCGTGTTCTATTGGACAATGCAAAATGGGCATATCCTGGAGGCTTCACAGAAGAAAAACAGAAAAACAGAAGAAGAAAAACAGCTTCATGGTTAAGAGAATGTGTGCTTCAACTTGGCCCAACTTTTATAAAACTCGGGCAGTTATCTTCAACAAGGTCAGATCTATTTCCACGTGAATTTGTCGATGAGCTTGCCAAGTTACAGGACAGAGTACCAGCTTTTTCACCAGCAAAAGCAAAAGGTTTTATTGAAAAAGAATTGGGAGCTCCAGTTGATATAATCTTTAAGGAGTTTGAAGAACGACCAATTGCAGCTGCTAGTCTTGGCCAGGTACATCGTGCAATATTACATAATGGAGAGAAAGTAGTGGTTAAAGTTCAAAGACCTGGTTTGAAGAAACTTTTTGACATTGATTTAAGAAATTTAAAGCTAGTTGCTGAATATTTTCAAAGAAGTGAATCTCTTGGTGGCCCTACAAGAGATTGGATAGGCATCTATGATGAATGTGCTAAGATCTTGTATGAGGAAATTGATTATATAAATGAAGGGAAAAATGCGGATAAATTTCGTCGGGATTTTCGTAATATAAAGTGGGTCCGCGTGCCTCAAGTATTCTGGGATTATTCTGCAACAAAGGTGCTGACCTTGGAATATGTACCAGGCATTAAGATCAATAATCTAGATTTGATAAAAGAAAGAGGTTACAGTCGATCTCGAATCTCTTCACACGCCATTGAAGCATACTTGATTCAGATACTGAAAACTGGTTTCTTTCATGCTGATCCTCATCCTGGAAATCTTGCTATTGACTCGGATGAATCATTAATCTATTATGATTTTGGCATGATGGGAGAGATTAAATCCTTTACAAGAGAAAGATTGATGGATCTTTTTTATGCAGTTTATGAAAAAGATGCTAAAAAGGTTATGAACAGTTTGATAAGTCTTGAAGCACTTCAACCTACTGGAGACATGTCATCAGTTCGAAGATCTGTCCAGTTCTTTTTGGATAATTCTCTAAATCAGTCACCAGATCAACAGACAACTTTGGCTGCAATAGGCGAGGATTTATTTTCTATAGCCACAGATCAACCTTTCCGGTTTCCATCCAACTTCACATTTGTAATCAGGGCATTTTCCACTCTTGAAGGAATTGGCTATTCACTCGATCCAGATTTTTCATTCGTCAAGATTGCTGCACCTTATGCACAGGAGCTGTTAGATCTCAAACAACAACGCAGTGGCACACAACTTGTCCAGGAAATACGAAAACAAGCCGATGATGCAAGATCATACACAATGTCAATGCCTTACAGAGTTCAACGAATCGAAGAGTTTGTGAAACAATTAGAATCAGGAGACCTTAAACTTCGTGTCAGAGTTCTCGAGTCTGAGAGAGCAGCTCGAAAGGCAACAATAATGCAAATGGGAACCTTGTATACAGTTCTCGGGGGTACACTTGTAAATATTGGTGTTACATTGAGCACTCAAGGCAACCAACTTATAGCAAACGGGTCATTTATTGCTGCAGGTGTTTTTCTGGCATTGCTTGTTAGGTCAATGCAAAGGGTGAAGAAGCTTGATAAATTTGAGAAGATGATTTAA 2028 38.81 MKYSTNGRPPKSDTNGQPVKSGPNGKPVNLGANGKPVTLGANGKPVKLASNGKPITMVPTSELVKNKPVNGSTQVINGTSLVKRETKALVKPVKVKEPSGFLPPEDLKVLPSDESFSWANENYNSVQRSIDVWSFVLSLRVRVLLDNAKWAYPGGFTEEKQKNRRRKTASWLRECVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPAKAKGFIEKELGAPVDIIFKEFEERPIAAASLGQVHRAILHNGEKVVVKVQRPGLKKLFDIDLRNLKLVAEYFQRSESLGGPTRDWIGIYDECAKILYEEIDYINEGKNADKFRRDFRNIKWVRVPQVFWDYSATKVLTLEYVPGIKINNLDLIKERGYSRSRISSHAIEAYLIQILKTGFFHADPHPGNLAIDSDESLIYYDFGMMGEIKSFTRERLMDLFYAVYEKDAKKVMNSLISLEALQPTGDMSSVRRSVQFFLDNSLNQSPDQQTTLAAIGEDLFSIATDQPFRFPSNFTFVIRAFSTLEGIGYSLDPDFSFVKIAAPYAQELLDLKQQRSGTQLVQEIRKQADDARSYTMSMPYRVQRIEEFVKQLESGDLKLRVRVLESERAARKATIMQMGTLYTVLGGTLVNIGVTLSTQGNQLIANGSFIAAGVFLALLVRSMQRVKKLDKFEKMI 675
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04368 675 MobiDBLite consensus disorder prediction 1 53 - -
Cich4g04368 675 Pfam ABC1 atypical kinase-like domain 207 453 IPR004147 -
Cich4g04368 675 SUPERFAMILY Protein kinase-like (PK-like) 209 455 IPR011009 -
Cich4g04368 675 MobiDBLite consensus disorder prediction 1 22 - -
Cich4g04368 675 CDD ABC1-ADCK3-like 207 454 - -
Cich4g04368 675 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 110 607 IPR050154 GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04368 K03688 ubiquinone biosynthesis protein
Cich4g04368 K08869 aarF domain-containing kinase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr2:82145743 Cich4g04368 Cich-Chr4:127616332 dispersed
Cich Cich-Chr3:45018305 Cich4g04368 Cich-Chr4:127616332 dispersed
Cich Cich-Chr4:127616332 Cich6g02627 Cich-Chr6:43588357 dispersed
Cich Cich-Chr4:127616332 Cich5g00894 Cich-Chr5:16179790 transposed