Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04368 | ATGAAATACAGCACCAATGGTCGACCTCCAAAGTCAGATACAAATGGTCAACCGGTGAAGTCGGGTCCCAATGGTAAACCGGTAAATTTAGGCGCCAATGGTAAACCAGTAACTTTAGGCGCCAATGGTAAACCTGTAAAGTTAGCTTCCAACGGTAAACCAATCACCATGGTTCCCACCAGTGAACTTGTAAAAAACAAACCAGTGAATGGATCAACACAAGTTATTAATGGAACAAGTCTTGTTAAGAGAGAGACCAAGGCACTAGTAAAGCCTGTAAAAGTTAAAGAACCCTCAGGTTTTCTACCTCCAGAAGATTTAAAGGTCTTACCATCAGACGAAAGTTTCAGTTGGGCAAATGAAAATTATAATTCGGTTCAAAGATCAATAGATGTTTGGTCTTTTGTTCTTTCTTTACGTGTTCGTGTTCTATTGGACAATGCAAAATGGGCATATCCTGGAGGCTTCACAGAAGAAAAACAGAAAAACAGAAGAAGAAAAACAGCTTCATGGTTAAGAGAATGTGTGCTTCAACTTGGCCCAACTTTTATAAAACTCGGGCAGTTATCTTCAACAAGGTCAGATCTATTTCCACGTGAATTTGTCGATGAGCTTGCCAAGTTACAGGACAGAGTACCAGCTTTTTCACCAGCAAAAGCAAAAGGTTTTATTGAAAAAGAATTGGGAGCTCCAGTTGATATAATCTTTAAGGAGTTTGAAGAACGACCAATTGCAGCTGCTAGTCTTGGCCAGGTACATCGTGCAATATTACATAATGGAGAGAAAGTAGTGGTTAAAGTTCAAAGACCTGGTTTGAAGAAACTTTTTGACATTGATTTAAGAAATTTAAAGCTAGTTGCTGAATATTTTCAAAGAAGTGAATCTCTTGGTGGCCCTACAAGAGATTGGATAGGCATCTATGATGAATGTGCTAAGATCTTGTATGAGGAAATTGATTATATAAATGAAGGGAAAAATGCGGATAAATTTCGTCGGGATTTTCGTAATATAAAGTGGGTCCGCGTGCCTCAAGTATTCTGGGATTATTCTGCAACAAAGGTGCTGACCTTGGAATATGTACCAGGCATTAAGATCAATAATCTAGATTTGATAAAAGAAAGAGGTTACAGTCGATCTCGAATCTCTTCACACGCCATTGAAGCATACTTGATTCAGATACTGAAAACTGGTTTCTTTCATGCTGATCCTCATCCTGGAAATCTTGCTATTGACTCGGATGAATCATTAATCTATTATGATTTTGGCATGATGGGAGAGATTAAATCCTTTACAAGAGAAAGATTGATGGATCTTTTTTATGCAGTTTATGAAAAAGATGCTAAAAAGGTTATGAACAGTTTGATAAGTCTTGAAGCACTTCAACCTACTGGAGACATGTCATCAGTTCGAAGATCTGTCCAGTTCTTTTTGGATAATTCTCTAAATCAGTCACCAGATCAACAGACAACTTTGGCTGCAATAGGCGAGGATTTATTTTCTATAGCCACAGATCAACCTTTCCGGTTTCCATCCAACTTCACATTTGTAATCAGGGCATTTTCCACTCTTGAAGGAATTGGCTATTCACTCGATCCAGATTTTTCATTCGTCAAGATTGCTGCACCTTATGCACAGGAGCTGTTAGATCTCAAACAACAACGCAGTGGCACACAACTTGTCCAGGAAATACGAAAACAAGCCGATGATGCAAGATCATACACAATGTCAATGCCTTACAGAGTTCAACGAATCGAAGAGTTTGTGAAACAATTAGAATCAGGAGACCTTAAACTTCGTGTCAGAGTTCTCGAGTCTGAGAGAGCAGCTCGAAAGGCAACAATAATGCAAATGGGAACCTTGTATACAGTTCTCGGGGGTACACTTGTAAATATTGGTGTTACATTGAGCACTCAAGGCAACCAACTTATAGCAAACGGGTCATTTATTGCTGCAGGTGTTTTTCTGGCATTGCTTGTTAGGTCAATGCAAAGGGTGAAGAAGCTTGATAAATTTGAGAAGATGATTTAA | 2028 | 38.81 | MKYSTNGRPPKSDTNGQPVKSGPNGKPVNLGANGKPVTLGANGKPVKLASNGKPITMVPTSELVKNKPVNGSTQVINGTSLVKRETKALVKPVKVKEPSGFLPPEDLKVLPSDESFSWANENYNSVQRSIDVWSFVLSLRVRVLLDNAKWAYPGGFTEEKQKNRRRKTASWLRECVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPAKAKGFIEKELGAPVDIIFKEFEERPIAAASLGQVHRAILHNGEKVVVKVQRPGLKKLFDIDLRNLKLVAEYFQRSESLGGPTRDWIGIYDECAKILYEEIDYINEGKNADKFRRDFRNIKWVRVPQVFWDYSATKVLTLEYVPGIKINNLDLIKERGYSRSRISSHAIEAYLIQILKTGFFHADPHPGNLAIDSDESLIYYDFGMMGEIKSFTRERLMDLFYAVYEKDAKKVMNSLISLEALQPTGDMSSVRRSVQFFLDNSLNQSPDQQTTLAAIGEDLFSIATDQPFRFPSNFTFVIRAFSTLEGIGYSLDPDFSFVKIAAPYAQELLDLKQQRSGTQLVQEIRKQADDARSYTMSMPYRVQRIEEFVKQLESGDLKLRVRVLESERAARKATIMQMGTLYTVLGGTLVNIGVTLSTQGNQLIANGSFIAAGVFLALLVRSMQRVKKLDKFEKMI | 675 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04368 | 675 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
| Cich4g04368 | 675 | Pfam | ABC1 atypical kinase-like domain | 207 | 453 | IPR004147 | - | |
| Cich4g04368 | 675 | SUPERFAMILY | Protein kinase-like (PK-like) | 209 | 455 | IPR011009 | - | |
| Cich4g04368 | 675 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Cich4g04368 | 675 | CDD | ABC1-ADCK3-like | 207 | 454 | - | - | |
| Cich4g04368 | 675 | PANTHER | CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED | 110 | 607 | IPR050154 | GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04368 | K03688 | ubiquinone biosynthesis protein | ||||
| Cich4g04368 | K08869 | aarF domain-containing kinase |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr2:82145743 | Cich4g04368 | Cich-Chr4:127616332 | dispersed | |
| Cich | Cich-Chr3:45018305 | Cich4g04368 | Cich-Chr4:127616332 | dispersed | |
| Cich | Cich-Chr4:127616332 | Cich6g02627 | Cich-Chr6:43588357 | dispersed | |
| Cich | Cich-Chr4:127616332 | Cich5g00894 | Cich-Chr5:16179790 | transposed |