AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04371 ATGATTTTCGACGGCGTCAACGTATCGTACAACCTGGATTTCCGCTCGACGAAAGATGACGCGTGGTACGCCTGCGGCGTCGTCCTAGACGGAAAGAAGCTCCGAGTGAAGTTCATGGATTTTGTTCAGAGCTGCCATGACGAGGTTTTCTCCATTGCTGATTTCCCAACTCACCGTGAAATCGAACAGTTTCTTCTTAGATTCCGTCCGACGTCTGAGCCGATAGACGAGAATGAGTGCTCCAAAGTGATAGAAGGCATGACGGTCTCTGCTACATATACAACTGATGGATTAGTTCGATTCTTCGACGCAATTGTTGATGCTGTGCATTACAAAGAACATAAGCCTGATAAGTGCCTATGCACCTTTTTACTATTCTGGCAACATGGCCCTGAAGAAGGCAACATAACTGCAGCAAGTATTGATGATTTATGCCTTATTATGTCCGGTGCCATTGATCCCAGAGTTACTGAATTCGCAAAGCTTGTGAAGGAAAAACTTAGAGGGGCCTCTTCTAAATCTAGTCTGACATCCAAGACTCCATTTTTGTCTAAAAAAACAAGTTCAAACCAAACTCTTAACAAGTTACAGGAGTTCTCTGGTAATGGAGACAGTTGTTATAGTGAATTCTCTGAAGGGAGGGAAAGATTCAACACTCAACTAATTGATCAAGACAGAGATATGGGAGGTGTCAAAGATACCGGCTTTCATCATTACATAATATTAGAAAATCTGGAGAAAAATCTATCTCCCATTTTAATAACAGACTTCATACATGAACAAACTTCAATCACAGCACAAGCATACGTTTTTCCAAGCTTGTCAACAGAAACATACGCAAGAGGAGCAATTGTTTCAAATAACAAATCAAAACTTAAGAGAATATATGAATTTATAAACAACCCAAACCACTTCATTGCATCTTCATCCGGAAGGCCATGGGTAATACCGGAAGAAATTCTTAGAATTGGAACTTTCAACATAAATCTGCAGAGTTTGCAGCCAAAATATGAGAATCAAAACACAGGGAGCAAGTTAATGATCGTATTGTTGGGAACAGAAGAATATATGAGAGCTAAACAACTAAAAAATATATATTTGGAATTTCGCGATCATTTAAATGGACTTGTGGAAAAGTTAGATAAGGAAGAGAAGAAGAACAAACATCCATTAAGTTCAAATTAG 1185 39.24 MIFDGVNVSYNLDFRSTKDDAWYACGVVLDGKKLRVKFMDFVQSCHDEVFSIADFPTHREIEQFLLRFRPTSEPIDENECSKVIEGMTVSATYTTDGLVRFFDAIVDAVHYKEHKPDKCLCTFLLFWQHGPEEGNITAASIDDLCLIMSGAIDPRVTEFAKLVKEKLRGASSKSSLTSKTPFLSKKTSSNQTLNKLQEFSGNGDSCYSEFSEGRERFNTQLIDQDRDMGGVKDTGFHHYIILENLEKNLSPILITDFIHEQTSITAQAYVFPSLSTETYARGAIVSNNKSKLKRIYEFINNPNHFIASSSGRPWVIPEEILRIGTFNINLQSLQPKYENQNTGSKLMIVLLGTEEYMRAKQLKNIYLEFRDHLNGLVEKLDKEEKKNKHPLSSN 394
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04371 394 Pfam SAWADEE domain 10 145 IPR032001 GO:0003682(InterPro)
Cich4g04371 394 Gene3D - 75 145 - -
Cich4g04371 394 PANTHER SAWADEE PROTEIN 8 386 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04371 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:127644550 Cich4g04371 Cich-Chr4:127651986 tandem