Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04378	ATGGCGGAAGCTTCCAGGATCTTCCAGACCACACTCATGCCTTCGCTATCCCAAAGTTTGTCTATCAGAAAGCCTTGCTCTCAAACAATGATCACTCAACGAAAAACCTCACCAGCGATCATCCGCTGCACGATCTCCACCAGCAGCAGCGACACAGCTAAGGCTACCACGTCTCAGCCGATACCATGGGGTTGCGAAATAGATTCTCTGGAGAACGCGGCTGCGTTGCAGAAATGGTTGACGGATTCCGGTTTGCCGCCTCAGAAAATGGACATACGGAAGGTTGATGTTGGAGAGAGGGGTCTCGTTGCCACTAATAACATAAGGAAGGGGGAGAAAATTCTATTTGTACCTCCCTCACTCGTTATTTCCGCCAATTCGGAGTGGAGTTTTCCAGAGGCTGGGGAAGTTTTGAAGAGATACGATGTGCCTGACTGGCCATTGATTGCGACTTACTTAATTAGTGAAGCAAGTCTTATGAAGTCTTCCAGATGGAGCAACTATATATCAGCATTACCAAGACAACCTTACTCACTTTTATACTGGACACGAGCTGAATTAGATAGGTACTTGGAAGCATCACAGATTAGAGAACGTGCAATTGAAAGAATCAACAATGTAACCGGAACATATAATGACTTGAGAGATAGAATTTTTTCCAAACATCCTAATTTATTTCCTGAAGAGATATTCAATATGGAAACATTTAGATGGTCCTTTGGAATTCTTTTCTCACGCTTGGTTCGATTACCTTCACTAGATGGAAGAGTTGCCTTAGTCCCTTGGGCAGATATGTTGAATCATAGTTGTGATGTAGAAACATTTTTGGATTATGATAAATCAACAAAGGGAGTTGTATTCACAACCGATCGTCCATACCTGCCAGGTGAGCAGGTGTTCATTTCATATGGCAGGAAATCTAATGGAGAACTTCTACTCTCATATGGATTTGTACCAAGGCAAGGGACAAACCCTCGTGACTCAGTTGAGCTGCCATTGTCCCTTAAAAAATCAGATAAATGTTACCAAGAAAAGGTGGAAGCTCTCAAGAAAAACGGCTTGTCAGCGTCACAGTGTTTTCCTTTACAAGTGACTGGTTGGCCATTGGAGCTGATGGCATATGCGTATTTAGCAGTTAGTCCCCCTAGTATGATTGGAAAGTTTGAGGAGATGGCTGCTGCAGCATCAAATAAAAACTCCAACAATAAGGAAATTAGGTATCCTGAACTAGAGGAACAAGCATTTCAATTTATCTTGGATAGCTGTGAATCCAGCATATCAAAGTACACCAAATTTCTCCAGGCAAGTGGATCAATGGATTTGGATATAACATCTCCAAAGCAACTCAACCGAAAAGTCTTCCTTAAACAACTAGCCGTAGACTTGTGCAATAGTGAACAAAGAATTCTCTTTCGTGCTCAATATATATTAAGGAGACAATTAAGGGATATGAAGAAAGGTGAACTGAAGGCCCTAAAATTGTTTGATAGTATCACAAAGTTCTTCAAATGA	1512	41.8	MAEASRIFQTTLMPSLSQSLSIRKPCSQTMITQRKTSPAIIRCTISTSSSDTAKATTSQPIPWGCEIDSLENAAALQKWLTDSGLPPQKMDIRKVDVGERGLVATNNIRKGEKILFVPPSLVISANSEWSFPEAGEVLKRYDVPDWPLIATYLISEASLMKSSRWSNYISALPRQPYSLLYWTRAELDRYLEASQIRERAIERINNVTGTYNDLRDRIFSKHPNLFPEEIFNMETFRWSFGILFSRLVRLPSLDGRVALVPWADMLNHSCDVETFLDYDKSTKGVVFTTDRPYLPGEQVFISYGRKSNGELLLSYGFVPRQGTNPRDSVELPLSLKKSDKCYQEKVEALKKNGLSASQCFPLQVTGWPLELMAYAYLAVSPPSMIGKFEEMAAAASNKNSNNKEIRYPELEEQAFQFILDSCESSISKYTKFLQASGSMDLDITSPKQLNRKVFLKQLAVDLCNSEQRILFRAQYILRRQLRDMKKGELKALKLFDSITKFFK	503

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04378	503	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	73	480	IPR050600	GO:0016279(PANTHER)\|GO:0018026(PANTHER)
	Cich4g04378	503	CDD	SET-RBCMT	87	318	IPR044431	GO:0016279(InterPro)\|GO:0018022(InterPro)
	Cich4g04378	503	SMART	set-7	88	310	IPR001214	GO:0005515(InterPro)
	Cich4g04378	503	Gene3D	set domain protein methyltransferase, domain 1	23	317	-	-
	Cich4g04378	503	SUPERFAMILY	RuBisCo LSMT C-terminal, substrate-binding domain	334	502	IPR036464	-
	Cich4g04378	503	ProSiteProfiles	SET domain profile.	88	304	IPR001214	GO:0005515(InterPro)
	Cich4g04378	503	Gene3D	-	322	489	IPR036464	-
	Cich4g04378	503	FunFam	Rubisco methyltransferase family protein	323	486	-	-
	Cich4g04378	503	Coils	Coil	197	217	-	-
	Cich4g04378	503	Pfam	Rubisco LSMT substrate-binding	337	470	IPR015353	-
	Cich4g04378	503	Pfam	SET domain	100	304	IPR001214	GO:0005515(InterPro)
	Cich4g04378	503	SUPERFAMILY	SET domain	72	320	IPR046341	-
	Cich4g04378	503	PIRSF	RMT-SET	1	500	IPR011192	GO:0009507(InterPro)\|GO:0030785(InterPro)
	Cich4g04378	503	FunFam	Ribulose-1,5 bisphosphate carboxylase-oxygenase large subunit N-methyltransferase, chloroplastic	56	317	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04378	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr4:127818576	Cich6g02469	Cich-Chr6:38653992	dispersed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Cich	SET	1.5e-16	No_clan		TR	SET