AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04382 ATGAAAATCGAGGGAGAGATTGCTGGCGGTGGTGGTGGCGGCGGCCGGACGACTTCGTTTCTTATCTTCTTGCTGTGGGGTGGACTCATGTACTATGTTTTCAATCTCGCACCCAACCAGACACCGGTATCAGATTATGATGCTGAAACCAGATTAGTGATGATAAATTCTAATAATTTTACTGCAAATCCTTTCAACTCGTGTTACTTTCCAGTCGACGGACATGTACCTCCTGAAAAAGCTGTGCTATTTGATCGGCGACGATGCTCAAAAGGGAGTGTTCCTGTGTTTCCGTTTCTGATACTTTCATTCTTCTTGGGTGCATATGGTCTTATACCCTATTTTGTTCTTCGGAGACCACCACCACCACCGACTGAAGAAGCTGACCTGAAAAAATGGCCCCTAAACTTTCTCGAGTCAAAATTGACCGCCGGGATAACATTTGTTGTAGGATTAGGTCTAATTATCTACGCGGGATTGGCCACCGGGGATGATTGGAGGGAGTATTTGCAGTACTTTGGAGGGAGTAAACTCATACATGTGACTAGCATTGACTTTGCGCTGCTATCTTCGTTTGCCCCTTTTTGGGTTTACAATGACATGAGTGCTCGAAAATGGAATAAAAAGGGGTTTTGGCTTCTACCATTGTCAGTGATTCCATTTTTGGGTCCTGCTTTATATCTTCTCTTGAGGCCATCGTTGTCAACAGTCTGCTTGCTTACATCAAAAGAGGAGTGA 738 44.58 MKIEGEIAGGGGGGGRTTSFLIFLLWGGLMYYVFNLAPNQTPVSDYDAETRLVMINSNNFTANPFNSCYFPVDGHVPPEKAVLFDRRRCSKGSVPVFPFLILSFFLGAYGLIPYFVLRRPPPPPTEEADLKKWPLNFLESKLTAGITFVVGLGLIIYAGLATGDDWREYLQYFGGSKLIHVTSIDFALLSSFAPFWVYNDMSARKWNKKGFWLLPLSVIPFLGPALYLLLRPSLSTVCLLTSKEE 245
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04382 245 Pfam Phospholipase-D-nuclease N-terminal 195 231 IPR027379 -
Cich4g04382 245 PANTHER - 8 243 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04382 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:127862267 Cich4g04382 Cich-Chr4:127867957 tandem