AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04395 ATGCATAAAACGGCGCAATCGTGGTTCACCGGAGGGCCGAGCCAGACGAACAGCGATCTGCTAAAGCAACCTCCCTCTCTTCTTGCTGATTGGAATGCCTACGCCTCATCTTCACAATCTAACCAAGATCTAGATTCTTCCAGCCTCGGATTCGATCTCGAAGCTGCAGTTAGGGATAAGGTTTCCGGCACTTTCAACGTAGTTTCAAAGGGAGTGAGGGACATACCTGGAAATTTACAATCTGCCACAAGCAATGTTCCATCCGGAAAATCATTTATGACATTTGGCATACTTCTTGCTGTTGGAGTATTTCTTGTCTTCATTGCAATCACCGTGTTTCTACCAGTCATGGTGCTTGTACCTCAGAAGTTTGCCATATGTTTCACTATCGGCTGTGCCCTCATAATCTGTTCCTTTTTTGCCCTCAAAGGATACAAAACTCAGTTTGCACATATGACATCTAAAGAGAGACTTCCTATTACATTGGGGTTTATTGGGAGCATGATGGGTACCATTTATGTTTCAATGGTGCTTCATAGTTACGTTCTTTCTGTGTTCTTCTCTATTTTACAGGTCATCTCATTGTCATATTATGCAATTTCCTACTTTCCTGGAGGATCAGCTGGTGTCAAATTCTTCACTTCTGCCATTACTTCTTCAATTCTAAGATGCTTTGGGAGGTGA 684 42.84 MHKTAQSWFTGGPSQTNSDLLKQPPSLLADWNAYASSSQSNQDLDSSSLGFDLEAAVRDKVSGTFNVVSKGVRDIPGNLQSATSNVPSGKSFMTFGILLAVGVFLVFIAITVFLPVMVLVPQKFAICFTIGCALIICSFFALKGYKTQFAHMTSKERLPITLGFIGSMMGTIYVSMVLHSYVLSVFFSILQVISLSYYAISYFPGGSAGVKFFTSAITSSILRCFGR 227
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04395 227 Pfam Got1-Sft2-like family 93 204 IPR007305 GO:0016192(InterPro)
Cich4g04395 227 PANTHER UNCHARACTERIZED 1 218 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04395 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
60579 Cich1g01666 Cich4g04395
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr1:62181979 Cich4g04395 Cich-Chr4:127995992 dispersed