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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04411 ATGGCGAAGCAAAAGATTGTCGTGAAGGTGACAATGACCAGCGAAAAGAAAACTCGTAAAGCTCTGAAGATCGCCGTTAGTATCTCCGGTGTGGAATCTGCTTCTTTTGCTGGTTCAGATAAAGACCAAATAGCGGTGACCGGAGAAGGAATTGACTCCGTTGAACTGACGACGTTGCTAAGAAAAGGTGTAGGATATACAGAGCTACTCAGTGTTGGTCCGGTGGAGGAGAAGAAATCCGACGCCGCCAAGGATACAAAACCCACGGTGGCGCCGGTATATGTTAATCCTTACCAATACTATTACAGCAGCTATGGCATGCCTTACTATGCATATGAGATGTGA 345 46.38 MAKQKIVVKVTMTSEKKTRKALKIAVSISGVESASFAGSDKDQIAVTGEGIDSVELTTLLRKGVGYTELLSVGPVEEKKSDAAKDTKPTVAPVYVNPYQYYYSSYGMPYYAYEM 114
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04411 114 PANTHER OS04G0464100 PROTEIN 4 88 IPR044296 -
Cich4g04411 114 Gene3D - 1 78 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04411 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:128884519 Cich4g04411 Cich-Chr4:128926343 dispersed
Cich Cich-Chr4:128926343 Cich4g04413 Cich-Chr4:128963654 dispersed
Cich Cich-Chr4:128894817 Cich4g04411 Cich-Chr4:128926343 tandem
Cich Cich-Chr4:128926343 Cich4g04412 Cich-Chr4:128933441 tandem