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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04416 ATGGCCAAGCAAAAGGTTGTCGTGAAGGTGACAATGACCAGCGAAAAGAAAAGTCGTAAAGCTCTGAAGATAGCCGTTAGTATCTCCGGGGTGGAATCAGCTTCTTTCGCTGGTTCAGATAAAGACCAAATAGCGGTGACCGGAGAAGGAATTGACTCCGTTGAACTGACGACGTTGCTAAGAAAAGGTGTAGGATACACACAGCTACTCAGTGTTGGTCCGGTGGAGGAGAAGAAACCCGACGCCGCCAATGAAACAAATCCCACGGTGGCGCCACTATATGTTGATCCTTATCAATACTACTACAGCAGCTATGGGATGCCTTACTATGCATATGCATATGAGATCTGA 351 47.01 MAKQKVVVKVTMTSEKKSRKALKIAVSISGVESASFAGSDKDQIAVTGEGIDSVELTTLLRKGVGYTQLLSVGPVEEKKPDAANETNPTVAPLYVDPYQYYYSSYGMPYYAYAYEI 116
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04416 116 PANTHER OS04G0464100 PROTEIN 4 87 IPR044296 -
Cich4g04416 116 Gene3D - 1 78 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04416 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:128963654 Cich4g04416 Cich-Chr4:129068929 dispersed
Cich Cich-Chr4:129068929 Cich4g04419 Cich-Chr4:129298861 dispersed
Cich Cich-Chr4:129031834 Cich4g04416 Cich-Chr4:129068929 tandem