Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04443 | ATGAGAGAAGAAGGTTTTAGCTCATCGGGGGACCCATTCCTTTCCCCAAATTCTCCTCCTCTTCCTCCGCCTCCTCCTACCGCTGCTGCAAGTTCGGCTGGGGCATCATCACCAGCTGTTCCCACCAATGCTGGCAGTACAGACTGGTTAGGTCATGGTCATGGATCCAAAGCAGGTTCTTTATCTCGAATTAGTTCACAGCCCACATGGATTTCATTAAGCACAAGTGCTCATGGTTCAGCTCTTGGCTCCTCTCAACCTTCATGTAGACCATGGGAAAGGGGCGATCTTCTAAAAAGACTGTCCACATTCAGACCTGCAAATTGGTTTGGAAAACCTAAGGCTGCTAGTTCACTTGCCTGTGCTGGAAGAGGCTGGATGAATGTGGATGTTGATAAGATTCAATGTGAGTCTTGTAGTGCAAACTTAAAATATAATGCACCAGATTCCTTTTCTACCCCTCATGGTGAAGATTTTGGCAATCAACTCGATGAAGGACACAAAGTTACGTGTCCTTGGAGAGGAAATAGTTGTGCTGAAAGTTTAGTCCAATTCCCTCCTACCCCTCCATCAGCTTTAATAGGAGGTTACAAAGACCGCTGTGATGGACTTCTTCAATTTCCAATTTTACCCCTAGTGGCTCCTTCAGCACTTGACCAGATGAAGGTTTCAAGAGGTCCAGAAATCGATCGGTTTCTGGCTCAATCTGATATGGAAAACACCAAAGACGTGTTATGCATATATTCACGTGCGCAAAATTTGATAAGTCTTTGTGGATGGGAGCCGAGGTGGCTTCCAAATGTTCAAGATTGTGAAGAAAATTCTGCTCAATCAGCAAGAAACGGTGGTTCTTTTAGTCCTATTAAAGATCATAAAAAAGATTCTTTAAAGAACGAAAGTAGATCGCCTTTATTGGATTGCAGCTTATGTGGGGCCACAGTAAGAATCTTGGACTTCATTCATGTCAACCGTCCTTCCCGTTTTGCCCCTACCAACATCGATGTCCCTGAAACAAGTAAAAAGATTGTAATCACACGTGGAATAAGTGCAGCAAGTGGAATCAGTGGGTGGATTGAAGAACATACAGAAGACATCGATGAAGCTGCAACTACAGGACAAAAAAGACCCTTATCCGACTTATACCAAGATCCAAATCTCGGGCAGGCGGCGGGCAGCGAGGTCGGAAATCGGGCAGCATCGTTTGAATCCCGAGGTCCAAACGAAGGTGGGAGTACTGTCGATAGGCCACATGGGATCATAGATAGTGTTGAAGGTGTTGTCATTGACCGTGATGGTGATGAAGTCAACGATAGCAAAATGTCTTATAAATTTGCACGTGTGTCTTACAGAAGAGACTCATCTGGTGCGGGTCCCAGCCGGGTTTCGTATTTTGAAAATGACAGAACTGCCCCTGTTACAAAAGATTCCGCTAGAGCTTCTTCTGTTATTGCTATGGATACGTATTGTCATAGTGACGATAATGATTCCATGGAAAGTGTCGAGAATCATCCCGGATATGGAGACGAGGTTAATTACCTTCAGGGACAAAATAGCACGAACGATGAGGAGGTTTTGAATGTTGTGGGAAAAGACGGTTTTACCCTTGCGGTTAGTGGAGGGAGTGTGGGAATGGGAGCGAGTCATGAAGCGGAGATACATGGGTCGGACGGTTTGATTCGTAGGACGGGAAGTGTTGTTGGTGACATGGAAGGGGGTACGGGTGTGAGTGTGACTGAGAACCAAGGGCAAACCGGTAATTTTGTCCCGGGAGTGACCGAGAGTCAGACGGATAGTGATGTGAATCTTTTACCCCATGAGCAAAGTTCTCACCCTTCTCTTTCTTGTAATGCGGTTGTATGTTCGGGTTTTGAAGCATCGAGAGATGAAGTGATGCAAGCGGGAAAGTCTTCTCCTAATGATGAATGTGGATTCCCAAATTACCCTCCTGCAAATGGGCTAGGGCCTCCAAATGGGGAAAGCAACTTTGAAGAACCAGTGGAGTTTGATCCAATCAAACATCATAATCTTTACTGCCCTTGGGTTAATGGAAATGTTGCTGCAGCTGGTGTGGGTGTGGGACCCACTTCAAGTGGTAGTGGTTTAGCTCTTTGTGGGTGGCAGTTGACTTTAGATGCTTTAGATGGATTTCAAGGGTCTGAACCCAATCAGACCGTTGAGTCTGAATCAGCTGCTTCTCTTTACAAGGATGATCATGATCATCAAGTTTCTGGTCGAAAACTCATGGCACGACATTCGTTCAATAAAAGCCATGGCTAA | 2277 | 45.45 | MREEGFSSSGDPFLSPNSPPLPPPPPTAAASSAGASSPAVPTNAGSTDWLGHGHGSKAGSLSRISSQPTWISLSTSAHGSALGSSQPSCRPWERGDLLKRLSTFRPANWFGKPKAASSLACAGRGWMNVDVDKIQCESCSANLKYNAPDSFSTPHGEDFGNQLDEGHKVTCPWRGNSCAESLVQFPPTPPSALIGGYKDRCDGLLQFPILPLVAPSALDQMKVSRGPEIDRFLAQSDMENTKDVLCIYSRAQNLISLCGWEPRWLPNVQDCEENSAQSARNGGSFSPIKDHKKDSLKNESRSPLLDCSLCGATVRILDFIHVNRPSRFAPTNIDVPETSKKIVITRGISAASGISGWIEEHTEDIDEAATTGQKRPLSDLYQDPNLGQAAGSEVGNRAASFESRGPNEGGSTVDRPHGIIDSVEGVVIDRDGDEVNDSKMSYKFARVSYRRDSSGAGPSRVSYFENDRTAPVTKDSARASSVIAMDTYCHSDDNDSMESVENHPGYGDEVNYLQGQNSTNDEEVLNVVGKDGFTLAVSGGSVGMGASHEAEIHGSDGLIRRTGSVVGDMEGGTGVSVTENQGQTGNFVPGVTESQTDSDVNLLPHEQSSHPSLSCNAVVCSGFEASRDEVMQAGKSSPNDECGFPNYPPANGLGPPNGESNFEEPVEFDPIKHHNLYCPWVNGNVAAAGVGVGPTSSGSGLALCGWQLTLDALDGFQGSEPNQTVESESAASLYKDDHDHQVSGRKLMARHSFNKSHG | 758 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04443 | 758 | MobiDBLite | consensus disorder prediction | 275 | 299 | - | - | |
| Cich4g04443 | 758 | MobiDBLite | consensus disorder prediction | 369 | 417 | - | - | |
| Cich4g04443 | 758 | MobiDBLite | consensus disorder prediction | 15 | 29 | - | - | |
| Cich4g04443 | 758 | Pfam | C3HC zinc finger-like | 91 | 207 | IPR012935 | GO:0008270(InterPro) | |
| Cich4g04443 | 758 | PANTHER | NUCLEAR-INTERACTING PARTNER OF ALK | 1 | 758 | - | GO:0005634(PANTHER) | |
| Cich4g04443 | 758 | MobiDBLite | consensus disorder prediction | 492 | 514 | - | - | |
| Cich4g04443 | 758 | MobiDBLite | consensus disorder prediction | 30 | 44 | - | - | |
| Cich4g04443 | 758 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
| Cich4g04443 | 758 | MobiDBLite | consensus disorder prediction | 633 | 663 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04443 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 63020 | Cich4g04443 | Cich7g00457 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr3:69144080 | Cich4g04443 | Cich-Chr4:129925616 | dispersed | |
| Cich | Cich-Chr4:129925616 | Cich5g02751 | Cich-Chr5:59190666 | dispersed | |
| Cich | Cich-Chr4:129925616 | Cich7g00457 | Cich-Chr7:14644647 | wgd |