Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04454	ATGGCTTCTTCTTCTACTTCTACTTCTACTACTACTTGGAGTAAACCCAGAAGCAGATTCTTGTATTCTTCGAAAGATGTATTTGGTTCATCTTCTTCTACGATTTCTTTCCGTAAGAAACCCAATGCACAAAATTCAATTGTTTGTGCACTTCAGACGCCTTCGATTCTTCAGTTTCCAAAACAGTCTGTTAGTAAAAGCTTAAACAATCCCATCGAATTGCTGTCTTCGTCTTCTTCTTCTCCGTCGGTCCAACAAAATTGGAACTTGTTACAGAAAGTTGCAGCGATGGCATTGGACGCCGTTGAAGATGGATTGAAAGCTAGGGAAAAATTACAGACGTTACCGAAAACAGCAGACCCAAATGTTCAAATCGCCGGGAACTTCAGTCCAGTACCGGAACAGCCTGTGCGCCACTGTCTACCGGTCGCCGGGAAGATTCCGGAACATATTCAAGGAGTTTACTTGAGAAATGGAGCCAACCCATTGTTCGAGCCTACCTCCGGCCACCATTTGTTTGACGGAGATGGCATGATTTATGCCGTGAAGTTCGATAATGGATCAGCTAGCTACGCTTGCCGGTTCACGGAGACGCAGAGGCTTGTTCAAGAACGTGCTATCGGAAAACCGGTATTTCCGAAAGCCATCGGTGAGCTTCATGGTCATTCTGGCATCGCTAAACTTCTACTGTTTTACGCTCGTGGGTTGTGTGGCTTGATTGACATCACTAAAGGACTTGGAGTGGCGAACGCCGGTTTGGTTTACTTTAACAACCGGCTTTTAGCCATGTCGGAGGATGATTTGCCTTATCACGTGCGGGTCACGGCTTCCGGCGACTTAAAGACTGGCGGCCGATACAACTTCGACGATCAGTTGAAGTCCACTATGATCGCGCACCCAAAGCTGGACCCAGTTTCCGGCGAGCTTTTCGCACTGAGCTACGATGTCATCCAGAAGCCTTACCTCAAATACTTCTGGTTTTCACCAGACGGCAAGAAATCGAAAGACGTTGCGATTGATTTGGGAAAGCCTACTATGGTTCATGACTTCGCGATCACAGAGAACTTCGTGGTGGTGCCGGACCACCAGGTGGTTTTCAAGATGTCAGAGATGATCACTGGTGGGTCACCGGTGGTGTACGACAAAGAGAAGGTATCGCGTTTTGGCGTTCTCGATAAGTACGCTGAAAACGGGTCGGATATCAAATGGGTCGAAGTTCCGGATTGTTTCTGTTTTCATCTCTGGAACGCGTGGGAAGAACCAGAATCCGACGAGGTCGTCGTGATCGGCTCCTGCATGACTCCGGCGGACTCCATTTTCAACGAATGTAACGAAGAACTCAAAAGCGTTTTATCAGAAATCCGTCTTAATCTCAAAACCGGTAAATCCACTCGTCGACCGATAATTTCTCCTGAAGATGACGTCAATTTAGAAGCAGGAATGGTGAACAAAAACCTCCTCGGCCGGAAATCCAAATACGCATACCTCGCCATCGCCGAGCCATGGCCGAAGGTCTCTGGTTTCGCCAAAGTCGATCTTTCCACCGGCGAGACCAAAAAATTCATCTACGGAGACGAGAAATACGGCGGCGAGCCTCTGTTTCTTCCCAGAGACCCCAACTCCGAAATCGAAGACGACGGCCACATCTTAGCCTTCGTTCACGACGAAAAAACATGGAAATCCGAGCTCCAAATCGTGAATGCAATGACAATGGACTTAGAAGCAACAGTTAAGCTGCCATCAAGGGTTCCCTATGGATTCCATGGAACCTTCATAAACGCCAAAGATTTGGCAACGCAAGCATAA	1806	47.67	MASSSTSTSTTTWSKPRSRFLYSSKDVFGSSSSTISFRKKPNAQNSIVCALQTPSILQFPKQSVSKSLNNPIELLSSSSSSPSVQQNWNLLQKVAAMALDAVEDGLKAREKLQTLPKTADPNVQIAGNFSPVPEQPVRHCLPVAGKIPEHIQGVYLRNGANPLFEPTSGHHLFDGDGMIYAVKFDNGSASYACRFTETQRLVQERAIGKPVFPKAIGELHGHSGIAKLLLFYARGLCGLIDITKGLGVANAGLVYFNNRLLAMSEDDLPYHVRVTASGDLKTGGRYNFDDQLKSTMIAHPKLDPVSGELFALSYDVIQKPYLKYFWFSPDGKKSKDVAIDLGKPTMVHDFAITENFVVVPDHQVVFKMSEMITGGSPVVYDKEKVSRFGVLDKYAENGSDIKWVEVPDCFCFHLWNAWEEPESDEVVVIGSCMTPADSIFNECNEELKSVLSEIRLNLKTGKSTRRPIISPEDDVNLEAGMVNKNLLGRKSKYAYLAIAEPWPKVSGFAKVDLSTGETKKFIYGDEKYGGEPLFLPRDPNSEIEDDGHILAFVHDEKTWKSELQIVNAMTMDLEATVKLPSRVPYGFHGTFINAKDLATQA	601

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04454	601	PANTHER	BETA-CAROTENE DIOXYGENASE	113	593	IPR004294	GO:0009570(PANTHER)\|GO:0010436(PANTHER)\|GO:0016121(PANTHER)\|GO:0016702(InterPro)
	Cich4g04454	601	Pfam	Retinal pigment epithelial membrane protein	133	592	IPR004294	GO:0016702(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04454	K09840	9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	63022	Cich4g04454	Cich7g00462

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr1:159191503	Cich4g04454	Cich-Chr4:130155387	dispersed
	Cich	Cich-Chr4:130155387	Cich8g00161	Cich-Chr8:4407000	dispersed
	Cich	Cich-Chr1:140850810	Cich4g04454	Cich-Chr4:130155387	transposed
	Cich	Cich-Chr2:123863643	Cich4g04454	Cich-Chr4:130155387	transposed
	Cich	Cich-Chr3:16225618	Cich4g04454	Cich-Chr4:130155387	transposed
	Cich	Cich-Chr7:86979819	Cich4g04454	Cich-Chr4:130155387	transposed
	Cich	Cich-Chr4:130155387	Cich7g00462	Cich-Chr7:14910746	wgd