Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04462 | ATGCGAGTACATGTCGATTGTCCCGGATGTGAGAACAAGATCCGAAAAGCTCTTCAAAGACTCAAAGGTGTGGAGAACGTAGATATAGACATGGGTTTACAGAAGGTGACTGTAACCGGATACGCTGACGAGAAGAAGGTGTTGAAAACCGTAAGAAAGACTGGCCGTCGAGCTGAGATCTGGAACGTACCTTACAACCCTGATATCCGCAGCCATAACTACAACGTTAATCAATATGCTCAACAACAACCACAAAACGCTGATTCTGGCCCAGGCCCCTCGGCGACGTTCTACACCAGGCAGCCATCATCGGCGTCCTCCTACAACTACTATAAGCACGGTTATGATAACCACCAGGGTTATAACCCAGTCCAGTCCTCTGGTTTAATTGGCCACCAGACTGGGGCTGCCTTTAGCGATGAAAATACTCAGGCTGCCTGTAACATCATGTAG | 453 | 48.34 | MRVHVDCPGCENKIRKALQRLKGVENVDIDMGLQKVTVTGYADEKKVLKTVRKTGRRAEIWNVPYNPDIRSHNYNVNQYAQQQPQNADSGPGPSATFYTRQPSSASSYNYYKHGYDNHQGYNPVQSSGLIGHQTGAAFSDENTQAACNIM | 150 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04462 | 150 | Pfam | Heavy-metal-associated domain | 3 | 56 | IPR006121 | GO:0046872(InterPro) | |
| Cich4g04462 | 150 | SUPERFAMILY | HMA, heavy metal-associated domain | 3 | 62 | IPR036163 | GO:0046872(InterPro) | |
| Cich4g04462 | 150 | ProSiteProfiles | Heavy-metal-associated domain profile. | 1 | 59 | IPR006121 | GO:0046872(InterPro) | |
| Cich4g04462 | 150 | Gene3D | - | 1 | 60 | - | - | |
| Cich4g04462 | 150 | PANTHER | COPPER TRANSPORT PROTEIN ATOX1-RELATED | 1 | 150 | IPR045181 | GO:0046872(InterPro) | |
| Cich4g04462 | 150 | CDD | HMA | 1 | 59 | IPR006121 | GO:0046872(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04462 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr3:27208758 | Cich4g04462 | Cich-Chr4:130440572 | dispersed | |
| Cich | Cich-Chr3:27221447 | Cich4g04462 | Cich-Chr4:130440572 | dispersed | |
| Cich | Cich-Chr4:130440572 | Cich7g02836 | Cich-Chr7:97136595 | dispersed | |
| Cich | Cich-Chr4:130440572 | Cich3g04400 | Cich-Chr3:117808815 | transposed |