AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04520 ATGTCCAGATGGTGGTTTGACACAAATTCCCGATTGACTTCTGTATTTCTCGATCCGGCCCGGAACGTCGGATGTGATGTTGCCTCCGGCGGCGTCGATCGCCTCTCTCGTTTCGCCGATGTTGAAACCGCAAGCGCCGTCGATTACCTCCCCTGCAGCTTCCTGTCACCTCAGCTGCTGATGAAACTGCCAGAACCACCAGCACTACCACCACCGCGTTCTGTCTCTGTCGTTACTGAACACTCCTCATCCTCCTTCAGTTCTCCGTCCACTTCGCCTGCTACTACTTCGGATATGTGGAATTACATATGGATCCCCTTTTTGATGTCTCTTATGAAAGAAGTCAGCTCCGCTAACGCTGCTTCTGAGTCAAAAATCTTCTTGCCATCTGCTTCTGTTGCTGGATTGACTTCCTCGTGTCCTGCGCCGGACCCCAAGCTGAATTACCGTCCGATAATCGGGATTCTCAGCCATCCGGGCGACGGTGCCTCCGGTCGACTTAATAACGCTACTAATGCCTCGTATATTGCTGCCTCGTATGTCAAATTTGTTGAATCTGCCGGTGCTAGGGTCATTCCTCTCATCTATAACGAACCTTCGGAGGTTCTCCAGAACAAACTCAATCTGATCAATGGTGTGCTCTTTACCGGTGGATGGGCTAAGAGTGGCCTCTACCTCGATATCGTAGACAGAATATTCAAGCAAGTCCTGAAGAAGAATGATGCAGGCGACCATTTCCCTTTGCTTGCAATATGCTTAGGTTTTGAACTCTTAACAATGATTGTTAGCAAAAACAATGATATCCTTGAAGGCTTTAGTGCATCTGATCAAGCTTCAACACTCCAGTTCATGAAGAACATAAACATTGAAGGAACTTTGTTTCAAAGATTTCCTCCTGAATTGCTTACAAAGATGAGCACAGAATGCCTTGTGATGCAAAACCATAAATTTGGCATATCACCAGAAACATTTCAAGGGAACATGGAATTGTGCAGTTTCTTCAAGATCTTGACAACGAGTGTTGATGAAAATAACCAGGAATATGTATCAACAGTTCAATCAAAAAGCTATCCTGTAACTGCTGTTCAGTGGCACCCCGAGAAAAATGCTTTTGAGTGGGGTTTGTCAATGATTCCACATTCAGATGATGCAATTCAAGTGACTCAACATGCTGCCAACTTCTTCGTGAGTGAGGCTAGAAAATCGTTCAACAGGCCACCTACTAAGGAAGTGCTGGATAACCTTATTTACAATCACAGCCCCACTTATTGTGGGTATGCTGGGAAGGGATATGATGAGGTTTATATATTTACGGATAAGATTGCTCGAATGTGA 1335 45.39 MSRWWFDTNSRLTSVFLDPARNVGCDVASGGVDRLSRFADVETASAVDYLPCSFLSPQLLMKLPEPPALPPPRSVSVVTEHSSSSFSSPSTSPATTSDMWNYIWIPFLMSLMKEVSSANAASESKIFLPSASVAGLTSSCPAPDPKLNYRPIIGILSHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPSEVLQNKLNLINGVLFTGGWAKSGLYLDIVDRIFKQVLKKNDAGDHFPLLAICLGFELLTMIVSKNNDILEGFSASDQASTLQFMKNINIEGTLFQRFPPELLTKMSTECLVMQNHKFGISPETFQGNMELCSFFKILTTSVDENNQEYVSTVQSKSYPVTAVQWHPEKNAFEWGLSMIPHSDDAIQVTQHAANFFVSEARKSFNRPPTKEVLDNLIYNHSPTYCGYAGKGYDEVYIFTDKIARM 444
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04520 444 Gene3D - 146 438 IPR029062 -
Cich4g04520 444 MobiDBLite consensus disorder prediction 76 94 - -
Cich4g04520 444 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 142 438 IPR015527 GO:0008242(InterPro)
Cich4g04520 444 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 103 438 IPR015527 GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER)
Cich4g04520 444 FunFam Folate gamma-glutamyl hydrolase 147 438 - -
Cich4g04520 444 SUPERFAMILY Class I glutamine amidotransferase-like 174 437 IPR029062 -
Cich4g04520 444 MobiDBLite consensus disorder prediction 71 94 - -
Cich4g04520 444 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 166 384 - -
Cich4g04520 444 Pfam Peptidase C26 151 367 IPR011697 GO:0016787(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04520 K01307 gamma-glutamyl hydrolase [EC:3.4.19.9]
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Event-related genes

Select Gene_1 Gene_2 Event_name
63029 Cich4g04520 Cich7g00508
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:131506067 Cich7g00508 Cich-Chr7:16600345 dispersed