Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04520 | ATGTCCAGATGGTGGTTTGACACAAATTCCCGATTGACTTCTGTATTTCTCGATCCGGCCCGGAACGTCGGATGTGATGTTGCCTCCGGCGGCGTCGATCGCCTCTCTCGTTTCGCCGATGTTGAAACCGCAAGCGCCGTCGATTACCTCCCCTGCAGCTTCCTGTCACCTCAGCTGCTGATGAAACTGCCAGAACCACCAGCACTACCACCACCGCGTTCTGTCTCTGTCGTTACTGAACACTCCTCATCCTCCTTCAGTTCTCCGTCCACTTCGCCTGCTACTACTTCGGATATGTGGAATTACATATGGATCCCCTTTTTGATGTCTCTTATGAAAGAAGTCAGCTCCGCTAACGCTGCTTCTGAGTCAAAAATCTTCTTGCCATCTGCTTCTGTTGCTGGATTGACTTCCTCGTGTCCTGCGCCGGACCCCAAGCTGAATTACCGTCCGATAATCGGGATTCTCAGCCATCCGGGCGACGGTGCCTCCGGTCGACTTAATAACGCTACTAATGCCTCGTATATTGCTGCCTCGTATGTCAAATTTGTTGAATCTGCCGGTGCTAGGGTCATTCCTCTCATCTATAACGAACCTTCGGAGGTTCTCCAGAACAAACTCAATCTGATCAATGGTGTGCTCTTTACCGGTGGATGGGCTAAGAGTGGCCTCTACCTCGATATCGTAGACAGAATATTCAAGCAAGTCCTGAAGAAGAATGATGCAGGCGACCATTTCCCTTTGCTTGCAATATGCTTAGGTTTTGAACTCTTAACAATGATTGTTAGCAAAAACAATGATATCCTTGAAGGCTTTAGTGCATCTGATCAAGCTTCAACACTCCAGTTCATGAAGAACATAAACATTGAAGGAACTTTGTTTCAAAGATTTCCTCCTGAATTGCTTACAAAGATGAGCACAGAATGCCTTGTGATGCAAAACCATAAATTTGGCATATCACCAGAAACATTTCAAGGGAACATGGAATTGTGCAGTTTCTTCAAGATCTTGACAACGAGTGTTGATGAAAATAACCAGGAATATGTATCAACAGTTCAATCAAAAAGCTATCCTGTAACTGCTGTTCAGTGGCACCCCGAGAAAAATGCTTTTGAGTGGGGTTTGTCAATGATTCCACATTCAGATGATGCAATTCAAGTGACTCAACATGCTGCCAACTTCTTCGTGAGTGAGGCTAGAAAATCGTTCAACAGGCCACCTACTAAGGAAGTGCTGGATAACCTTATTTACAATCACAGCCCCACTTATTGTGGGTATGCTGGGAAGGGATATGATGAGGTTTATATATTTACGGATAAGATTGCTCGAATGTGA | 1335 | 45.39 | MSRWWFDTNSRLTSVFLDPARNVGCDVASGGVDRLSRFADVETASAVDYLPCSFLSPQLLMKLPEPPALPPPRSVSVVTEHSSSSFSSPSTSPATTSDMWNYIWIPFLMSLMKEVSSANAASESKIFLPSASVAGLTSSCPAPDPKLNYRPIIGILSHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPSEVLQNKLNLINGVLFTGGWAKSGLYLDIVDRIFKQVLKKNDAGDHFPLLAICLGFELLTMIVSKNNDILEGFSASDQASTLQFMKNINIEGTLFQRFPPELLTKMSTECLVMQNHKFGISPETFQGNMELCSFFKILTTSVDENNQEYVSTVQSKSYPVTAVQWHPEKNAFEWGLSMIPHSDDAIQVTQHAANFFVSEARKSFNRPPTKEVLDNLIYNHSPTYCGYAGKGYDEVYIFTDKIARM | 444 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04520 | 444 | Gene3D | - | 146 | 438 | IPR029062 | - | |
| Cich4g04520 | 444 | MobiDBLite | consensus disorder prediction | 76 | 94 | - | - | |
| Cich4g04520 | 444 | ProSiteProfiles | Gamma-glutamyl hydrolase domain profile. | 142 | 438 | IPR015527 | GO:0008242(InterPro) | |
| Cich4g04520 | 444 | PANTHER | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE | 103 | 438 | IPR015527 | GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER) | |
| Cich4g04520 | 444 | FunFam | Folate gamma-glutamyl hydrolase | 147 | 438 | - | - | |
| Cich4g04520 | 444 | SUPERFAMILY | Class I glutamine amidotransferase-like | 174 | 437 | IPR029062 | - | |
| Cich4g04520 | 444 | MobiDBLite | consensus disorder prediction | 71 | 94 | - | - | |
| Cich4g04520 | 444 | ProSiteProfiles | Glutamine amidotransferase type 1 domain profile. | 166 | 384 | - | - | |
| Cich4g04520 | 444 | Pfam | Peptidase C26 | 151 | 367 | IPR011697 | GO:0016787(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04520 | K01307 | gamma-glutamyl hydrolase [EC:3.4.19.9] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 63029 | Cich4g04520 | Cich7g00508 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr4:131506067 | Cich7g00508 | Cich-Chr7:16600345 | dispersed |