AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04531 ATGGAAAATTTAAAGATCGATGAAGCAATACAAAAAGCTGGAGAAAAGTATAGATCGTTCCTCCATGAAGAAGCTGATAACACCCATTGGAGACATGGTGGCCCTCCTATCTATGATGCCGTTAACAAACTCTTTGAAGAAGGCCGGACCAAGGTTTGGGAAAAAGGATCATTAGAAGAAACCGTTCAAAACGCAATAAAGTCATGGGAGATGGAGCTCAGCCACAAGACTCGGATACAAGACTTTAAGACCATTAATCCTGATAAGTTCAAGCTTATTGTCAATGGGAAGGAGGGATTGTCGGGGGAGGAAACACTGAAGGTGGGGAGTTACAATGCATTACTGAAGAGTACACTTCCGGCAGAGTTGCAGTACTACAAAGCAGAAGAAGAGACCTTCGAATCGTCTCACGACGTTTTCCGGTCGGCATTTCCTCGTGGATTTGCGTGGGAGGTGATAAGCGTTCATTCTGGACCGCCGGTGATCTCTTACAAGTTCCGGCATTGGGGTTACTTTGAAGGTCCGTTCAAAGGCCATGCGCCTACCGGCGAAATGGTTGATTTCTACGGCATGGGCATCCTCAAGGTTGATGAATCATTGAAAGCAGAAGATGTTGAGGTCTATTATGATCCAGCAGATCTTATCTCGAAGCTGCTCAAGGGACCGTTGACTTCCGAACAGCAAAGTACCGCCGGTGATGATTCTCCGGCGATCACCGGTAGCTGCCCCTATCAGAAGCAAGCGTGA 747 46.99 MENLKIDEAIQKAGEKYRSFLHEEADNTHWRHGGPPIYDAVNKLFEEGRTKVWEKGSLEETVQNAIKSWEMELSHKTRIQDFKTINPDKFKLIVNGKEGLSGEETLKVGSYNALLKSTLPAELQYYKAEEETFESSHDVFRSAFPRGFAWEVISVHSGPPVISYKFRHWGYFEGPFKGHAPTGEMVDFYGMGILKVDESLKAEDVEVYYDPADLISKLLKGPLTSEQQSTAGDDSPAITGSCPYQKQA 248
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04531 248 Gene3D - 122 222 - -
Cich4g04531 248 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 9 244 IPR053218 -
Cich4g04531 248 MobiDBLite consensus disorder prediction 225 248 - -
Cich4g04531 248 SUPERFAMILY NTF2-like 132 218 IPR032710 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04531 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:131708469 Cich5g00155 Cich-Chr5:4729519 dispersed