Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04539	ATGGCTTCGTCTTCTCTCTCACTAATCTGTTTCTTCTTCATCTTCCGATCTTTCTACATCTCCGACGCTGTTGTTCCTCCTTCAGACACCTTCCGGTACGTAAACCAAGGCGATTTCGGAATCTACGAATCGGAATACAACCCAAATTATCGAGCTCTGCCACCATTTACCACCCCATTCCAGCTATGTTTCTATAACACCACCCCCAATGCCTACACTCTTGGTCTCCGTATGGGGACGAGACGTACCCAATCAGTCATGCGATGGGTGTGGGAAGCCAACAGAGGCAACCCAGTTGGCGAAAACGCCACATTCTCATTCGGCTCCGACGGAAACCTTGCACTGGCTCATGCAGATGGCCGGATCGCATGGCAAACAAACACCGCCAACAAGGGCGTCGTTGGTTTTGCCATACTCTCGAACGGTAACATGGTGCTTCGTGATTCCAAGGATCGTTTTGTCTGGCAAAGCTTTGATTCACCATCTGATACGCTTTTGTTTGGTCAATCTCTCCGTATCGGAGGTCCGGTGAAGCTCGTTAGCAGGGCTTCAACGACGGACAATTCAAACGGGATGTATAGTATGGTGTTGGAGCCAAAACGATTGGGTTTGTACTATAACACCATGCTTTACTGGTCTTCCTCCTTTACAGAAGTCAACAAACCAAATGTGAATTTGGTTAATGCAACGTTCGAAATCCAGGAAACCGAATACGAGGAGAACTACTTCAACGCGCTGAGGTTTCATCTCTCGAACTCTAATGATCAACCTTATTTGAACTTCGACATAACCAGATACAGCAGCACGTTATCATATCTCCGATTGGGCAGCGATGGGAATTTACGAGTCTACTCTTACCGTGCAAATGTAACTGCAAATGCATGGAGTCTGCTGTTCACTCTTTTTGATAGAAGAGTGAGCGAGAGGGCGGAGATAGTAGAAGACAAGTGCCAACTTCCCGAAAATTGCGGCAAGTTTGGGCTATGTGAGGATAGCCAATGCGTTGGATGTCCGTCGCCAAATGCTGTGTTTGCTTGGAGCAAAGCTTGCAATGTAAAGATGGCGGATTGTAACCCGAGTAGTTTCCGTTACTACCAGCTGAAAGGGGTTGACCATTTCACAGTAAAATACAGTCCGGGGACCGGGCCTGTGAAGCAGAGAGATTGCGAGAGCAAATGCACCAAGGATTGCAAGTGCATGGGGTATTTCTATCGCACGGATCAGTCGAGGTGTTGGATCGCTTACGAGTTGAAAACGTTGACGAGGGTTGGGAACTCGACTCATTTGGCGTACATCAAAACACCTGTCCGATAG	1314	47.79	MASSSLSLICFFFIFRSFYISDAVVPPSDTFRYVNQGDFGIYESEYNPNYRALPPFTTPFQLCFYNTTPNAYTLGLRMGTRRTQSVMRWVWEANRGNPVGENATFSFGSDGNLALAHADGRIAWQTNTANKGVVGFAILSNGNMVLRDSKDRFVWQSFDSPSDTLLFGQSLRIGGPVKLVSRASTTDNSNGMYSMVLEPKRLGLYYNTMLYWSSSFTEVNKPNVNLVNATFEIQETEYEENYFNALRFHLSNSNDQPYLNFDITRYSSTLSYLRLGSDGNLRVYSYRANVTANAWSLLFTLFDRRVSERAEIVEDKCQLPENCGKFGLCEDSQCVGCPSPNAVFAWSKACNVKMADCNPSSFRYYQLKGVDHFTVKYSPGTGPVKQRDCESKCTKDCKCMGYFYRTDQSRCWIAYELKTLTRVGNSTHLAYIKTPVR	437

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04539	437	SUPERFAMILY	alpha-D-mannose-specific plant lectins	69	213	IPR036426	-
	Cich4g04539	437	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5	59	434	IPR051343	-
	Cich4g04539	437	CDD	B-lectin	44	161	IPR001480	-
	Cich4g04539	437	PIRSF	SLG	1	437	IPR035446	-
	Cich4g04539	437	Pfam	D-mannose binding lectin	90	173	IPR001480	-
	Cich4g04539	437	Gene3D	-	56	159	IPR036426	-
	Cich4g04539	437	ProSiteProfiles	Bulb-type lectin domain profile.	38	159	IPR001480	-
	Cich4g04539	437	SMART	blect-4	44	161	IPR001480	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04539	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr4:131902355	Cich4g04541	Cich-Chr4:131918903	dispersed
	Cich	Cich-Chr4:131806597	Cich4g04539	Cich-Chr4:131902355	tandem