Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04550	ATGCTTAACTTAGCCAATCTGGCAGAAGAAGTTCAGATTGCTTACCGAAGGAGAATCAAGCTCAAGAAGGGTGATTTTGCTGATGAAGCCAATGCAACAACTGAATCCGACATTGAGGAAACCTTCAAGAGACTTGTGCATCAACTTAAGAAGTCCCCTGAAGAGGTATTCGATGCACTCAAGAATCAAACAGTTGACTTAGTCTTGACTGCTCATCCAACCCAATCTGTCCGCAGATCTTTGCTTCAAAAGCATGGAAGAATCCGTGACTGTTTGGCTCAGTTATACGCCAAGGACATTACTCCAGATGATAAACAAGAACTGGATGAGGCTTTGCATAGAGAAATTCAAGCTGCTTTCCGTACAGATGAGATCAGAAGAACAGCTCCAACCCCACAAGATGAAATGAGAGCTGGAATGAGTTACTTCCATGAAACAATCTGGAAAGGTGTCCCTAAATTCTTGCGCCGTGTTGACACTGCTCTTAAGAACATTGGAATCAATGAACGTGTTCCCTATAATGCCCCTCTAATTCAGTTCTCTTCATGGATGGGTGGTGACCGTGATGGTAACCCGAGGGTTACCCCTGAGGTAACAAGGGATGTTTGTTTACTTGCTAGAATGATGGCTGCAAACATGTACTTTTCCCAGATTGAAGATCTTATGTTTGAGATGTCCATGTGGCGTTGTACTGATGAACTTCGTGTTCGTGCTGAAGAGCTGTATAGATCAGCAAGGAGAGATGTGAAGCACTACATAGAGTTTTGGAAACAGGTTCCTCCAACTGAACCATATCGTGTAATTCTTGGTGATGTAAGAGACATGTTATACAAAACCCGTGAAAGATCTCGCCATCTTTTAGCCCATGGGAAATCTGAAATCCCTGAAGAAGCAGTTTACACCAATGTTGAACAGTTCTTGGAACCACTCGAGCTATGCTACCGATCCCTATGCGCATGTGGGGACCGCGTAATCGCAGACGGAAGTCTCCTTGACTTTTTGCGCCAGGTGTCAACATTCGGTCTCTCCCTAGTCAAACTCGACATCCGCCAAGAATCCGACCGCCACACAGACGTCCTCGACGCAATCACCCAACACCTCGAAATCGGGTCGTACCGCGAATGGTCCGAAGAAAAACGCCAACAATGGCTCCTCTCGGAACTTTCCGGAAAACGCCCGCTCTTCGGTTCCGACCTTCCAAAAACCGAAGAAATCGCCGACGTCCTCGACACCTTCCACGTCATCGCCGAACTCCCCTCCGACTGCTTCGGCGCTTACATCATCTCCATGGCCACGTCACCGTCCGACGTGTTGGCCGTCGAGCTTCTCCAACGCGAATGCCACGTCGCGAAACCGTTACGTGTCGTCCCGCTCTTTGAAAAGCTCGCTGACCTGGAAGCGGCCCCCGCAGCGGTCGCGAGGCTGTTTTCAATCGAGTGGTATAAGAACCGGATCGACGGGAAACAGGAAGTGATGATCGGGTATTCGGATTCCGGGAAGGACGCGGGGCGGTTGTCGGCCGCGTGGCAGTTGTATAAAGCTCAGGAAGAGCTTATAAAAGTTGCTAACGAGTTTGGGGTGAAGCTTACGATGTTTCATGGACGCGGTGGGACGGTGGGACGCGGTGGCGGGCCCACGCATTTGGCTATTTTGTCGCAGCCGGCGGGGACGATTCATGGGAGTTTGAGAGTTACGGTTCAGGGTGAGGTTATCGAGCAGTCGTTTGGTGAAGAGCATTTGTGTTTTAGGACATTGCAAAGGTTTTGCGCGGCGACACTCGAGCACGGGATGAATCCGCCGATTTCACCGCGACCGGAATGGCGTAAACTTATGGACGAGATTGCGGTGTTTGCTACGGAACAGTATCGGTCGATTGTGTTCCAGGAACCGCGGTTTGTCGAGTATTTCCGCCTGGCAACACCGGAATTGGAATACGGGCGCATGAACATCGGGAGTCGTCCATCAAAACGTAAACCAAGCGGCGGAATCGAATCCCTCCGCGCCATTCCCTGGATCTTCGCCTGGACCCAAACCCGATTCCATCTCCCGGTCTGGCTCGGCTTCGGAGCCGCATTCAAACACGCCATCCAAAAAGACTCCAAAAATCTCCAAATGCTCCAAGAAATGTACAAAACCTGGCCCTTTTTCCGCGTCACAATCGATTTAGTCGAAATGGTCTTCGCCAAAGGCGACCCCGGAATCGCCGCCCTTAACGACAAACTCCTCGTCTCCGAAGACTTATGGTCCTTCGGAGAATTACTCAGAGCAAACTACGAAGAAACCAAAGACCATCTCCTCAAGATTGCGGGGCATAAGGAAGTTCTTGAGGGCGATCCTTACTTGAAACAAAGACTTCGTCTACGTGATTCCTACATTACGACTCTAAACGTGTGTCAAGCGTATACACTAAAACGGATCCGTGACCCGAACTATCATGTCACATTGAGGCCTCATATTTCTAAAGAGTATTCGGAACCGAGTAAACCGGCTGATGAACTTATCCATTTGAACCCGACGAGTGAGTATGCACCGGGTCTCGAGGACACGTTGATCTTGACCATGAAGGGTATTGCTGCGGGTATGCAGAACACCGGTTAA	2598	49.73	MLNLANLAEEVQIAYRRRIKLKKGDFADEANATTESDIEETFKRLVHQLKKSPEEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRDCLAQLYAKDITPDDKQELDEALHREIQAAFRTDEIRRTAPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANMYFSQIEDLMFEMSMWRCTDELRVRAEELYRSARRDVKHYIEFWKQVPPTEPYRVILGDVRDMLYKTRERSRHLLAHGKSEIPEEAVYTNVEQFLEPLELCYRSLCACGDRVIADGSLLDFLRQVSTFGLSLVKLDIRQESDRHTDVLDAITQHLEIGSYREWSEEKRQQWLLSELSGKRPLFGSDLPKTEEIADVLDTFHVIAELPSDCFGAYIISMATSPSDVLAVELLQRECHVAKPLRVVPLFEKLADLEAAPAAVARLFSIEWYKNRIDGKQEVMIGYSDSGKDAGRLSAAWQLYKAQEELIKVANEFGVKLTMFHGRGGTVGRGGGPTHLAILSQPAGTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFCAATLEHGMNPPISPRPEWRKLMDEIAVFATEQYRSIVFQEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHAIQKDSKNLQMLQEMYKTWPFFRVTIDLVEMVFAKGDPGIAALNDKLLVSEDLWSFGELLRANYEETKDHLLKIAGHKEVLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPNYHVTLRPHISKEYSEPSKPADELIHLNPTSEYAPGLEDTLILTMKGIAAGMQNTG	865

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04550	865	Hamap	Phosphoenolpyruvate carboxylase [ppc].	3	865	IPR022805	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cich4g04550	865	ProSitePatterns	Phosphoenolpyruvate carboxylase active site 2.	491	503	IPR033129	-
	Cich4g04550	865	Pfam	Phosphoenolpyruvate carboxylase	1	865	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cich4g04550	865	ProSitePatterns	Phosphoenolpyruvate carboxylase active site 1.	68	79	IPR018129	-
	Cich4g04550	865	PANTHER	PHOSPHOENOLPYRUVATE CARBOXYLASE	1	865	IPR021135	GO:0005829(PANTHER)\|GO:0006099(InterPro)\|GO:0008964(PANTHER)\|GO:0008964(InterPro)\|GO:0009507(PANTHER)\|GO:0015977(InterPro)\|GO:0048046(PANTHER)\|GO:0048366(PANTHER)
	Cich4g04550	865	SUPERFAMILY	Phosphoenolpyruvate-pyruvate domain	1	865	IPR015813	GO:0003824(InterPro)
	Cich4g04550	865	FunFam	Phosphoenolpyruvate carboxylase 1	208	343	-	-
	Cich4g04550	865	Gene3D	Phosphoenolpyruvate-pyruvate domain	208	343	-	-
	Cich4g04550	865	PRINTS	Phosphoenolpyruvate carboxylase signature	340	360	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cich4g04550	865	PRINTS	Phosphoenolpyruvate carboxylase signature	67	80	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cich4g04550	865	PRINTS	Phosphoenolpyruvate carboxylase signature	531	560	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cich4g04550	865	PRINTS	Phosphoenolpyruvate carboxylase signature	120	136	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cich4g04550	865	PRINTS	Phosphoenolpyruvate carboxylase signature	663	689	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cich4g04550	865	PRINTS	Phosphoenolpyruvate carboxylase signature	180	195	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cich4g04550	865	PRINTS	Phosphoenolpyruvate carboxylase signature	489	509	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04550	K01595	phosphoenolpyruvate carboxylase [EC:4.1.1.31]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	60641	Cich1g01859	Cich4g04550
	63032	Cich4g04550	Cich7g00558

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr2:99589252	Cich4g04550	Cich-Chr4:132118110	dispersed
	Cich	Cich-Chr1:36693544	Cich4g04550	Cich-Chr4:132118110	wgd
	Cich	Cich-Chr4:132118110	Cich7g00558	Cich-Chr7:18162146	wgd