Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04563 | ATGGCGACTCGTGTTCTCCTTCGCACCCTTCTCACCTCCGCCAATCAAACCCTAATCCCTCGCTCCTTTACCAGTTCTGCTTATCTTATGCGCTTCCGCCCTGTTGTCGCCATCGCCGCCGCTAATATCCGTCAGTCCTCACTTGCGGCTACCAGTGCCCGTGCTTTCTCAACTCGTCAGACCACATCGTCTCTGAATGATTCGAACCCTAATTGGACAAATCGTCCCCCAAAGGAGACGATTCTACTCGATGGTTGCGATTTTGAGCACTGGCTTGTCGTGGTGGAGACACCCCAAGGCGAGCCGACTAGAGACGAGATAATCGAGTCGTATATCAATACCCTAGCTCAGGTCGTCGGCAGCTATGATGAAGCAAGAATGAAGATCTACTCAGTCTCAACAAGATGCTATTACGCATTTGGAGCCCTTGTGTCTGAAGAAGTTTCTTACAAAATCAAGGAGTTACCTGGTGTTCGTTGGGTGCTCCCTGATTCTTACTTGGATGTTAAGAACAAAGATTACGGAGGTGAACCATTTATTGATGGAAAGGCGGTTCCATATGATCCAAAGTACCATGAAGAGTGGATTAGAAACAATGCGCGTGCCAATGAGAGAAATAGGAGAAATGACAGGCCTAGAAACTTTGACCGGTCAAGAAACTTTGAAAGAAGAAGAGAAAACATGCAAAACAACCAAGGACCACCCGGTATGGGCGGTCCACCACCTCCAACCAACTTCCGCGGTCCACCACCCAACATGGGAGGTGGACCACCTAAGATGGGTGGTGGACCACCACCCAGTCAAATGGGTGGTGGACCACCACCCAGTCACATGGGAGGCGGACCACCCAACATGGGAGGACCACCATCCAATATGGGTGGACCTCCAAACATGGGAGGTCCACCACCCAGTAACATGGGTTATGGAGGTCAGTCCAATAACTGGAATGGCCCACCACAGCCCTATGGCGGAGGGCCGCCAAACATGGGAGGAGGAATGAGGCCTAATAATGGGCCGCCTTCTAATTACCAGCAGCAGGGGTGGAATGGACCAAATGCTGGAGGAAACGGGTATCAATCTGGTGGAAACCCTTACCAGAATCAGAATGTACCTGGAAGAGACATGCCGCCTGCAGCTGCCAACTATGAATGA | 1152 | 51.04 | MATRVLLRTLLTSANQTLIPRSFTSSAYLMRFRPVVAIAAANIRQSSLAATSARAFSTRQTTSSLNDSNPNWTNRPPKETILLDGCDFEHWLVVVETPQGEPTRDEIIESYINTLAQVVGSYDEARMKIYSVSTRCYYAFGALVSEEVSYKIKELPGVRWVLPDSYLDVKNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQNNQGPPGMGGPPPPTNFRGPPPNMGGGPPKMGGGPPPSQMGGGPPPSHMGGGPPNMGGPPSNMGGPPNMGGPPPSNMGYGGQSNNWNGPPQPYGGGPPNMGGGMRPNNGPPSNYQQQGWNGPNAGGNGYQSGGNPYQNQNVPGRDMPPAAANYE | 383 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04563 | 383 | PANTHER | MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED | 16 | 229 | IPR039206 | GO:0005739(PANTHER)|GO:0016554(InterPro)|GO:0080156(PANTHER) | |
| Cich4g04563 | 383 | MobiDBLite | consensus disorder prediction | 203 | 226 | - | - | |
| Cich4g04563 | 383 | MobiDBLite | consensus disorder prediction | 335 | 370 | - | - | |
| Cich4g04563 | 383 | MobiDBLite | consensus disorder prediction | 235 | 302 | - | - | |
| Cich4g04563 | 383 | Pfam | Multiple organellar RNA editing factor 1, MORF domain | 88 | 179 | IPR054059 | - | |
| Cich4g04563 | 383 | MobiDBLite | consensus disorder prediction | 203 | 383 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04563 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 60652 | Cich1g01868 | Cich4g04563 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr4:132325835 | Cich3g02962 | Cich-Chr3:55473787 | dispersed | |
| Cich | Cich-Chr9:33608406 | Cich4g04563 | Cich-Chr4:132325835 | transposed | |
| Cich | Cich-Chr1:27141861 | Cich4g04563 | Cich-Chr4:132325835 | transposed | |
| Cich | Cich-Chr3:32062692 | Cich4g04563 | Cich-Chr4:132325835 | transposed | |
| Cich | Cich-Chr1:36852317 | Cich4g04563 | Cich-Chr4:132325835 | wgd |