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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04581 ATGGCACAATTGCCGCCAAAAGTGCCAACAATGGCGCAGAATTGGCCGTCGTTTGCGTACCAGATGATGTCGATGCCGTCTTCTGCAGCTCAGCCACCGAATTGGGTGGATGAGTTCCTTGATTTCTCGTCAGTAAGGAGGAGCGCACATCGGAGATCTGTGAGCGATCCAATTGCTTTCATTGAATCGCCGTTCATTGAGGAATGCCGGAATTCTAATGGAAATAATTCGTTGATGCCTTGCTCTAACAACATTGGATTTGAACGTTTGGATGATGAGCAGTTTAGTTCCATGTTTCCCGACGACGTCGCAGCGAATGTACCGTCGACAAGGTCGTCGTCTAATCCGTCTACGCCGTCTGATCAAAACAGTGATAATGACGAGGCGAAGCCAACGCCGCCACCAGAACCACAGCACCACCAGCAGCCGAAAAATGAACCTGCGGAGGTGGAAGACGACGGTGGTTGCCAACCTGAGACAGATACAGCTAAACCTTGCTTTAATTTCTCTAGCGAGGGCACCACCATTGTCGATCCAAAGAGGGTAAAAAGGATTCTAGCAAATCGTCAGTCTGCTCAAAGATCACGAGTGAGGAAGTTGCAGTACATTTCTGAACTCGAACGAAGCGTCACCACATTACAGACGGAAGTATCGGCATTATCGCCACGAGTGGCGTTTTTGGACCATCAAAGGCTGGTTTTGAACGTCGACAATAGTGCACTTAAGCAACGGATAGCAGCTTTAGCACAAGACAAGATTTTCAAAGACGCTCACCAAGAAGCATTGAAGAAGGAGATAGAGAGGTTAAGGAAAGTGTATCACGAACAGAACATGCAGAAGGCGGCGGAGGAAGAGGAGGAGGAGGAGGAGGTGAACGGAACCAGTACTGGCGGAAACGACGGTGGCTCCGCTGCCGTAAACAGGAGTGATACGGAGGGAGGAAGTAGAATCTGCTAA 957 49.43 MAQLPPKVPTMAQNWPSFAYQMMSMPSSAAQPPNWVDEFLDFSSVRRSAHRRSVSDPIAFIESPFIEECRNSNGNNSLMPCSNNIGFERLDDEQFSSMFPDDVAANVPSTRSSSNPSTPSDQNSDNDEAKPTPPPEPQHHQQPKNEPAEVEDDGGCQPETDTAKPCFNFSSEGTTIVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLVLNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRKVYHEQNMQKAAEEEEEEEEVNGTSTGGNDGGSAAVNRSDTEGGSRIC 318
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04581 318 FunFam Basic leucine zipper 61 179 252 - -
Cich4g04581 318 SUPERFAMILY Leucine zipper domain 180 234 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cich4g04581 318 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 241 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cich4g04581 318 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 198 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cich4g04581 318 MobiDBLite consensus disorder prediction 102 168 - -
Cich4g04581 318 MobiDBLite consensus disorder prediction 277 318 - -
Cich4g04581 318 SMART brlzneu 176 240 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cich4g04581 318 CDD bZIP-plant-RF2 181 231 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cich4g04581 318 PANTHER BASIC LEUCINE ZIPPER 34 1 289 IPR052483 GO:0003677(PANTHER)|GO:0005634(PANTHER)|GO:0045893(PANTHER)
Cich4g04581 318 Pfam bZIP transcription factor 180 225 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cich4g04581 318 MobiDBLite consensus disorder prediction 106 129 - -
Cich4g04581 318 Coils Coil 259 286 - -
Cich4g04581 318 Gene3D - 179 251 - -
Cich4g04581 318 MobiDBLite consensus disorder prediction 294 310 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04581 K20557 transcription factor VIP1
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Event-related genes

Select Gene_1 Gene_2 Event_name
63042 Cich4g04581 Cich7g00595
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:132770052 Cich9g00943 Cich-Chr9:20190924 dispersed
Cich Cich-Chr2:103548276 Cich4g04581 Cich-Chr4:132770052 transposed
Cich Cich-Chr4:132770052 Cich7g00595 Cich-Chr7:19050054 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cich9g00433 ACH 10 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 47.305 2.05e-41 135.0
Cich9g00653 . 15 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 36.232 2.63e-19 76.6
Cich9g00943 . 3 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 49.143 1.73e-88 270.0
Cich9g01784 . 29 390 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 63.315 3.39e-150 429.0
Cich9g01894 . 62 243 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 57.377 1.52e-58 187.0
Cich9g02657 . 25 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 78.906 1.19e-65 196.0
Cich8g00876 . 4 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 58.058 1.99e-158 454.0
Cich8g01155 . 31 158 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G18160 38.281 8.31e-23 87.0
Cich8g01189 ACH 1 303 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 57.267 2.09e-109 320.0
Cich8g01269 ACH 5 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 43.125 1.02e-26 97.4
Cich8g01776 . 54 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 59.13 7.83e-39 128.0
Cich8g01778 . 12 165 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G13600 50.323 1.03e-35 121.0
Cich8g03036 ACH 11 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 52.332 5.79e-109 322.0
Cich7g00271 . 119 454 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34000 37.391 1.08e-46 159.0
Cich7g00334 ACH 9 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.057 2.86e-42 137.0
Cich7g00542 . 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 25.688 1.49e-12 64.3
Cich7g00543 ACH 114 316 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 25.106 1.30e-15 73.6
Cich7g00595 ACH 1 314 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 48.256 1.80e-93 278.0
Cich7g01671 . 105 200 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G31370 51.546 1.44e-16 74.3
Cich7g02408 . 113 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 24.883 3.25e-14 68.6
Cich7g03691 ACH 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 49.877 1.88e-106 315.0
Cich6g00456 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 55.614 2.72e-112 329.0
Cich6g01251 . 213 303 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 39.56 1.92e-14 70.5
Cich6g02227 ACH 24 214 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 36.649 2.25e-28 104.0
Cich6g03267 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 75.831 3.07e-180 499.0
Cich6g03519 . 147 469 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 35.135 9.83e-37 137.0
Cich6g04016 . 63 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 34.649 1.25e-19 81.6
Cich6g04246 . 155 218 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 59.375 3.01e-17 78.6
Cich5g00457 ACH 9 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 50.61 8.38e-46 145.0
Cich5g00616 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 54.768 1.31e-120 356.0
Cich5g00941 . 213 283 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 48.0 1.59e-06 47.0
Cich5g01505 . 37 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 37.037 3.67e-22 84.7
Cich5g02483 . 121 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 27.083 4.74e-17 77.8
Cich5g02485 . 69 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 27.609 2.51e-20 87.8
Cich5g02487 . 121 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 27.511 2.70e-16 75.5
Cich5g03925 . 174 244 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 76.056 5.88e-29 106.0
Cich5g04158 . 285 381 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 63.636 5.75e-28 105.0
Cich5g04423 . 200 249 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 80.0 1.61e-20 86.3
Cich5g04486 . 397 431 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G19290 54.286 9.81e-07 42.7
Cich4g00815 . 1 441 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G36270 48.542 4.54e-111 332.0
Cich4g01065 . 21 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 57.373 3.43e-140 403.0
Cich4g01090 . 105 200 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G31370 50.515 4.66e-16 71.6
Cich4g01221 . 16 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 53.994 5.94e-96 284.0
Cich4g01223 . 6 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 52.632 4.79e-98 289.0
Cich4g01464 . 7 315 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 45.342 1.03e-63 202.0
Cich4g01629 . 217 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 53.623 7.83e-16 70.9
Cich4g02075 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 54.731 1.09e-115 338.0
Cich4g02650 . 21 94 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 67.089 1.83e-25 100.0
Cich4g02709 . 51 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G15830 42.308 1.78e-16 70.1
Cich4g03563 . 41 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 32.09 7.39e-26 104.0
Cich4g03659 . 120 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 46.635 5.21e-42 144.0
Cich4g03999 . 1 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 47.765 1.01e-92 282.0
Cich4g04180 ACH 15 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 50.327 7.71e-41 133.0
Cich4g04373 . 174 244 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 76.056 4.34e-29 106.0
Cich4g04581 ACH 1 304 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 56.563 1.09e-102 302.0
Cich3g00531 . 53 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 64.655 1.07e-42 140.0
Cich3g00786 . 1 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 39.744 1.51e-23 90.5
Cich3g03685 ACH 9 163 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.375 2.70e-41 138.0
Cich3g03979 ACH 38 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 50.382 1.89e-102 306.0
Cich3g04315 . 204 253 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 53.704 6.13e-07 45.4
Cich3g04395 . 62 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 41.525 1.18e-33 124.0
Cich3g04625 ACH 1 312 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 49.856 5.52e-93 279.0
Cich3g04804 ACH 1 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 39.873 1.91e-20 80.9
Cich3g05005 . 52 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 69.828 1.39e-51 162.0
Cich2g01079 . 213 253 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 69.767 1.03e-08 53.1
Cich2g02609 . 1 307 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 52.134 4.08e-95 282.0
Cich2g02918 . 1 522 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 58.261 0.0 536.0
Cich2g03033 . 1 228 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 64.135 7.82e-104 301.0
Cich2g03237 . 24 306 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 41.304 2.12e-73 230.0
Cich2g04773 . 9 212 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G41070 42.358 3.87e-41 139.0
Cich1g00422 . 79 110 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G32150 84.375 1.00e-15 68.9
Cich1g00684 . 52 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 49.367 2.08e-171 506.0
Cich1g00759 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 65.476 2.85e-146 417.0
Cich1g00887 . 6 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 55.385 9.42e-100 294.0
Cich1g01244 ACH 4 322 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 29.745 3.38e-30 116.0
Cich1g03042 . 214 253 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 64.286 1.23e-06 45.4
Cich1g03076 . 121 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 26.695 1.44e-18 82.4
Cich1g03132 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 75.831 7.01e-179 496.0
Cich1g03235 . 142 271 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 45.038 1.65e-21 92.8
Cich1g03393 . 327 359 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G32150 57.576 7.16e-07 44.7
Cich1g04373 . 1 153 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 72.549 1.71e-58 177.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Cich bZIP_1 9.4e-10 CL0018 TF bZIP