AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04586 ATGGGGTGGACATGGAAGGAAGGACACTTAGACTTATTCCTGGTGCCATTAGGGTTATTGATCATGTGTGCCTATCATCTATTCCTTCTTTACAGATACCACATCATCCCTGAAACTACAACAATCGGCTTTGAGAACCATAATAAAAGTGCATGGGTTGAGAAGATGCTGCAGATTGAAGCTAGAGATAGAGGGTTTGCTGTATCGGTCCTTACCAGTCACTTAAACGCAGCAATCTCTCTTGCTTCAATTTCGTTAGCTTTATGCTCTCTTATCGGAGCTCTACTTGGAGGTTCTTCCACAAACTTCTTCGCAAGTCATTTTGTCTATGGGGACAAAAGCCACACCACAAGCTACATAAAGTACATTTCCATGATAACTTGCTTCTTATTAGCATTTGCATGTTTTGTACAAACTACAAGGCACTTTGTACATGCAAGTTTCCTCATTAGCATGCCCAAGGGTGATGTTCCGGTGAAGTACATCCAAAAGGCGTTGGTAAGAGGAAGCATCTTCTGGCTTGTTGGATTGCGTGTGCTCTACTTTGCAGGCACCTTGGTATTATGGATATTTGGTCCAATTCCAATGCTTGTTTCTTCAGTAGGTTTAGTGGTACTTTGCCATTTTCTAGATACTAATAATGATGAAATGATTCAGTATCAGTCTAAACAGAATGGTAGAGGTGGTAATTTTCTGAGGAATATTGAGCATAATATGAGTGCAAGGGTTGGGGGTTTTGAACATAATAGAAGGTCACACATAGAAGAAACAAACTCGCTACAGCCTCAAGATATCATGTAA 801 40.57 MGWTWKEGHLDLFLVPLGLLIMCAYHLFLLYRYHIIPETTTIGFENHNKSAWVEKMLQIEARDRGFAVSVLTSHLNAAISLASISLALCSLIGALLGGSSTNFFASHFVYGDKSHTTSYIKYISMITCFLLAFACFVQTTRHFVHASFLISMPKGDVPVKYIQKALVRGSIFWLVGLRVLYFAGTLVLWIFGPIPMLVSSVGLVVLCHFLDTNNDEMIQYQSKQNGRGGNFLRNIEHNMSARVGGFEHNRRSHIEETNSLQPQDIM 266
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04586 266 Pfam Protein of unknown function, DUF599 14 214 IPR006747 -
Cich4g04586 266 PANTHER OS02G0292800 PROTEIN 4 226 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04586 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
63044 Cich4g04586 Cich7g00606
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:132901244 Cich7g00607 Cich-Chr7:19321341 dispersed
Cich Cich-Chr9:7159159 Cich4g04586 Cich-Chr4:132901244 transposed
Cich Cich-Chr4:132901244 Cich7g00606 Cich-Chr7:19284158 wgd