AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04597 ATGTCAATGCTGCTGGGTTCTTTTCGTAGTCATTTCTTCAAACAGTTGTCGTGCACTTCATTCTCGTCGATTCGTAGCACATCAAGTCTCACCCCTGGATCCAATTTTATGTTATTTGGCTCCACCAAAGATTACCCATCAAGAAAGTTGTTAGATTTCTTGAAATTGAGTTCAGTTACAGCGGTATTCTCCACATCTTCCGATTCTGAAACTCCGACAACTGGTTCGTACCTATCTGTGGACATACAATGTCGTCAAGATGTCGCGGATATGCTTTCAGAAGCTCTTTTATGTTTTGGTGCTACTTCCACAATCATGGTTGAACCAGAAACTTCCAACTCTAGTGACGAGGTCTCTATTGGTTCGATCTTCTTGGTATCTCATGACGTCCATCAAAGTATCGCACTAGCAGCAAATTCAATAGGCCTGAAAGAAACACCCGTTTACAAAGTCACAACGGGTTACCAATCTGACTGGATCGAGAATTCTCGGGAATCTTTCCATCCCATTGAAGTTACAGAAGGACTTTGGATTGTACCCGAGTGGATAACACCCCCAAATCTTGAAGCAACAATTATAACTCTAAACCCCGGTTTAGCATTTGGAACAGGAGACCACCCGACTACCAAATTATGTCTCTTACAATTACACGGTTTAATCAAAGGTGGAGAAACGGTTCTTGATTATGGCACAGGTTCCGGGATTCTTGCAATTGCGGCACTAAAGTTCGGTGCAGTCAAATCAGTTGGGTTAGATATAGATCCTCAAGCGATAACAGCCGCACGTTATAATGCGACTCTGAACAACATAGGACCTGAGAAATTGGAATTGCGGCTTGTTCCTAGTAATCCTAGGAACACGAGTTCTTCATCGAGAGGTGAATGGAATTTGGCTATGAAAGGTAACAGTGTCGAAGAGAATGATTTAGTGGAAGTGAGAGAAACGTTCGATGTTGTTATCGGGAACATTCTTTTGAATCCTTTGTTAGATTTGGCGGATGAGATTGTTTCTTATGCGAAGCCTGGTGGTGTAGTTGGTCTTTCTGGAATTATCTTGGAGCAGGTACCGACTGTTGTAGATCGATACTCGAATCTTCTGGAAGGTATGATTGTATCAGAGATTGATGACTGGGCATGCATACGTGGCACAAAGAAGAAGGCTTACGTGGGTTAG 1173 42.71 MSMLLGSFRSHFFKQLSCTSFSSIRSTSSLTPGSNFMLFGSTKDYPSRKLLDFLKLSSVTAVFSTSSDSETPTTGSYLSVDIQCRQDVADMLSEALLCFGATSTIMVEPETSNSSDEVSIGSIFLVSHDVHQSIALAANSIGLKETPVYKVTTGYQSDWIENSRESFHPIEVTEGLWIVPEWITPPNLEATIITLNPGLAFGTGDHPTTKLCLLQLHGLIKGGETVLDYGTGSGILAIAALKFGAVKSVGLDIDPQAITAARYNATLNNIGPEKLELRLVPSNPRNTSSSSRGEWNLAMKGNSVEENDLVEVRETFDVVIGNILLNPLLDLADEIVSYAKPGGVVGLSGIILEQVPTVVDRYSNLLEGMIVSEIDDWACIRGTKKKAYVG 390
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04597 390 Pfam Ribosomal protein L11 methyltransferase (PrmA) 77 385 - -
Cich4g04597 390 Hamap Ribosomal protein L11 methyltransferase [prmA]. 75 384 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Cich4g04597 390 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 77 385 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
Cich4g04597 390 CDD AdoMet-MTases 225 345 - -
Cich4g04597 390 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 364 IPR029063 -
Cich4g04597 390 Gene3D Vaccinia Virus protein VP39 166 389 IPR029063 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04597 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]