Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04609	ATGGCGTCCTTTCACAAATCTCTCTACTTGTTCGTGACTTTCTTCTTCGCGTTGCTCGCTTTTTCCAAAGCTTACACCTTCAACGTCGGCGGTAGATACGGCTGGACTTTACACCCTTCTGAAAGCTACAATGAATTTTCCGGCAGATCAAGGTTTATCGTTAACGACACCCTCCATTTCAAGTACAATGCTGCGTCGGATTCTGTACTGGAAGTGAGTAAAAGCGATTATGATAATTGCAACATGAACAACCCCATCACCACCCTCACCGGCGGCGATTCTTTCTTTAACTTGAACCGTTCAGGACCTTTTTACTTCATCAGTGGTAATAAATCTCACTGTGATCAAGGTCAGAAGCTAGAGGTGGTAGTTATATCGCCTAAAACGAGGCGATCACATTCTGCCGCTCCACCTCCGGGAGGATCTTCACCGGTTCCAAACGCGTCCCCTGTTTCATCACCACCTGTATCGACTAGTCCGATGGGCTCCCCTGTTTCGTCCCCGCCGGAACCTGGGACTACTCCGATGGGCTCCCCTATGTCTTCCCCGCCGGAACCTGGGACTACTCCGATGGGCTCCCCTTTTTCTTCCCCGCCGGAACCTGGGACTACTCCGATGGGCTCCCCTATTTCATCACCACCAGAATCTGGAATGAGTCCGGCGGATTCTCCTGGAGGTATCTCAGCTTCGCCGACAGGTAATCCGTCTGACGTGTCCGCACCAGCACCAATGAGGTCGCCGTCGGCAAGAGTATCAGTTTCTGAAACCTTGAACTTCTCACTCGTCGTTATGATATTCGGGTTGGGGTTCTTTTATTAG	819	50.79	MASFHKSLYLFVTFFFALLAFSKAYTFNVGGRYGWTLHPSESYNEFSGRSRFIVNDTLHFKYNAASDSVLEVSKSDYDNCNMNNPITTLTGGDSFFNLNRSGPFYFISGNKSHCDQGQKLEVVVISPKTRRSHSAAPPPGGSSPVPNASPVSSPPVSTSPMGSPVSSPPEPGTTPMGSPMSSPPEPGTTPMGSPFSSPPEPGTTPMGSPISSPPESGMSPADSPGGISASPTGNPSDVSAPAPMRSPSARVSVSETLNFSLVVMIFGLGFFY	272

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04609	272	PANTHER	BLUE COPPER PROTEIN	17	159	IPR039391	GO:0009055(InterPro)\|GO:0046658(PANTHER)
	Cich4g04609	272	SUPERFAMILY	Cupredoxins	24	125	IPR008972	-
	Cich4g04609	272	CDD	OsENODL1-like	25	125	IPR041846	-
	Cich4g04609	272	FunFam	Early nodulin-like protein 1	24	129	-	-
	Cich4g04609	272	MobiDBLite	consensus disorder prediction	139	153	-	-
	Cich4g04609	272	Gene3D	-	25	136	IPR008972	-
	Cich4g04609	272	MobiDBLite	consensus disorder prediction	128	251	-	-
	Cich4g04609	272	MobiDBLite	consensus disorder prediction	209	241	-	-
	Cich4g04609	272	Pfam	Plastocyanin-like domain	35	118	IPR003245	GO:0009055(InterPro)
	Cich4g04609	272	MobiDBLite	consensus disorder prediction	161	208	-	-
	Cich4g04609	272	ProSiteProfiles	Phytocyanin domain profile.	25	126	IPR003245	GO:0009055(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04609	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	63045	Cich4g04609	Cich7g00636

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr4:136169362	Cich4g04609	Cich-Chr4:133392666	transposed
	Cich	Cich-Chr4:133392666	Cich7g00636	Cich-Chr7:20156628	wgd

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cich9g01170	ACH	12	163	PhytocyaNIN gene family	AT2G27035	34.839	1.47e-22	86.7
	Cich9g01484	.	33	160	PhytocyaNIN gene family	AT1G64640	60.294	3.73e-49	156.0
	Cich7g00636	ACH	6	186	PhytocyaNIN gene family	AT5G53870	40.299	1.94e-38	135.0
	Cich6g01217	.	69	114	PhytocyaNIN gene family	AT2G27035	55.319	1.14e-11	57.4
	Cich6g01941	.	6	168	PhytocyaNIN gene family	AT5G15350	51.534	8.34e-55	169.0
	Cich6g03291	.	11	200	PhytocyaNIN gene family	AT1G08500	55.612	3.86e-71	215.0
	Cich5g01007	.	2	159	PhytocyaNIN gene family	AT5G15350	39.024	1.89e-40	132.0
	Cich4g03631	.	19	136	PhytocyaNIN gene family	AT1G17800	38.655	3.96e-21	82.0
	Cich4g04609	ACH	7	159	PhytocyaNIN gene family	AT4G27520	50.327	4.29e-44	150.0
	Cich4g04761	.	13	181	PhytocyaNIN gene family	AT3G20570	50.888	7.00e-55	171.0
	Cich3g01059	.	42	187	PhytocyaNIN gene family	AT1G08500	31.818	1.89e-17	80.5
	Cich3g03145	ACH	9	151	PhytocyaNIN gene family	AT1G79800	41.958	4.66e-40	132.0
	Cich3g03562	.	8	129	PhytocyaNIN gene family	AT1G48940	52.8	3.52e-46	147.0
	Cich1g02079	ACH	8	150	PhytocyaNIN gene family	AT1G79800	44.755	3.22e-37	136.0