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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04612 ATGGAGATTATATCAAGGCAACACGAAAGAGAAATCCTATCTCCGGCGAACTCCCCGTCCAGCCACGGCAGCAGTAGCAACAGCAATGGACATACCGTCGGCGGTGGCGCTGCCCAAACTCCACCTCTAACTCCAAGACCCGTTTCAAGATCTGAACCAAATCCATACCCAACAACCTTCGTCCAAGCCGACACCACTTCCTTTAAACAAGTAGTACAGATGCTAACCGGATCATCCAAACCGACCCAACAACCAGATCCGGCACCGTCGAAAATTTCCATACCGCCGATCAAAACCGGTCAACAGAAGAAACAAGGGTTCAAGCTCTACGAGCGTCGGAACAGCCTGAAAAACGGGCTGATGATCAACGCGTCGGTGCCGAAGTTCCACGGCCACGGGTTATCGCCGCGAGTCCATGAAATACTCTCGCCAAGCATTCTTGATTTTCCGTCGCTTGTTCTTAGTCCGGTGACGCCATTGATCGAAGACCAGTTTAATAAATCGTCACCGTCGATTGGGAACTCGTCGGAAGAAGAGAGGGTAATTGCGGAAAAGGGATTTTTTTTGCATCCGTCGCCTAGGGCCGCGACACCACATGGGACGACGGAGCCACAGCTGCTGCCTCTTTTTCCGTTGACCTCGCCGCGGGTATCGGAGTCGTCGATTTAG 669 52.47 MEIISRQHEREILSPANSPSSHGSSSNSNGHTVGGGAAQTPPLTPRPVSRSEPNPYPTTFVQADTTSFKQVVQMLTGSSKPTQQPDPAPSKISIPPIKTGQQKKQGFKLYERRNSLKNGLMINASVPKFHGHGLSPRVHEILSPSILDFPSLVLSPVTPLIEDQFNKSSPSIGNSSEEERVIAEKGFFLHPSPRAATPHGTTEPQLLPLFPLTSPRVSESSI 222
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04612 222 MobiDBLite consensus disorder prediction 53 87 - -
Cich4g04612 222 MobiDBLite consensus disorder prediction 11 35 - -
Cich4g04612 222 MobiDBLite consensus disorder prediction 190 222 - -
Cich4g04612 222 Pfam VQ motif 55 80 IPR008889 -
Cich4g04612 222 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 25 218 IPR039611 -
Cich4g04612 222 MobiDBLite consensus disorder prediction 1 104 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04612 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
63048 Cich4g04612 Cich7g00641
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr3:29017045 Cich4g04612 Cich-Chr4:133404093 dispersed
Cich Cich-Chr3:52588176 Cich4g04612 Cich-Chr4:133404093 dispersed
Cich Cich-Chr4:133404093 Cich5g01057 Cich-Chr5:18626119 dispersed
Cich Cich-Chr4:133404093 Cich7g00641 Cich-Chr7:20242336 wgd