Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04628	ATGGCCGGAGTTCTCGAAACCCTCACTGTTCCTCGCGCTACCGGATTTCCGGCGTCTTCTCTAACTCCAATCGCCTCTTCTCCCGTTTGTCAACTCTCCCTCCGTCGGAACTTTGCGCCGGAATCAAGAGGCTTAAAGTTAAACATCCATTCCTTCCGCTCTTCTGGATCCGTGAGATTGAGGTCGAAGTTCGGCCGTCGTGGTGGACGAATCGTCTGTGAAGCTCAGGAAACAGCCGTACAAGTACTCCCTGTGACTGATGACACCTGGCAATCACTTGTTCTTGAATCCTCCGTTCCTGTTCTAGTTGAATTTTGGGCTCCATGGTGTGGTCCTTGTCGAATGATTCACCCTGTGATTGATGAACTCGCAAAAGAATACACAGGAAAACTCAGTTGCTACAAGGTAAACACAGACGAGAGTCCTTCAATTGCAACCAAATATGGAATAAGAAGCATTCCAACTGTCATGGTCTTCAAAGAAGGAGAGAAGAAAGATGCAGTTATTGGTGCAGTTCCAAAAACAACTCTGTCTGCATGCATTGAGAAGTTCTTGTAG	558	47.31	MAGVLETLTVPRATGFPASSLTPIASSPVCQLSLRRNFAPESRGLKLNIHSFRSSGSVRLRSKFGRRGGRIVCEAQETAVQVLPVTDDTWQSLVLESSVPVLVEFWAPWCGPCRMIHPVIDELAKEYTGKLSCYKVNTDESPSIATKYGIRSIPTVMVFKEGEKKDAVIGAVPKTTLSACIEKFL	185

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04628	185	NCBIfam	thioredoxin	86	184	IPR005746	GO:0015035(InterPro)
	Cich4g04628	185	PRINTS	Thioredoxin family signature	101	109	-	-
	Cich4g04628	185	PRINTS	Thioredoxin family signature	149	160	-	-
	Cich4g04628	185	PRINTS	Thioredoxin family signature	109	118	-	-
	Cich4g04628	185	CDD	TRX-family	88	177	-	-
	Cich4g04628	185	ProSitePatterns	Thioredoxin family active site.	102	120	IPR017937	-
	Cich4g04628	185	PANTHER	GEO12009P1	58	185	-	GO:0005737(PANTHER)\|GO:0015035(PANTHER)
	Cich4g04628	185	SUPERFAMILY	Thioredoxin-like	73	185	IPR036249	-
	Cich4g04628	185	Gene3D	Glutaredoxin	81	185	-	-
	Cich4g04628	185	ProSiteProfiles	Thioredoxin domain profile.	72	185	IPR013766	-
	Cich4g04628	185	FunFam	Thioredoxin	76	185	-	-
	Cich4g04628	185	Pfam	Thioredoxin	82	182	IPR013766	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04628	K03671	thioredoxin

Event-related genes

Select	Gene_1	Gene_2	Event_name
	60675	Cich1g01939	Cich4g04628
	63050	Cich4g04628	Cich7g00667

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr4:133603174	Cich6g00157	Cich-Chr6:1969418	dispersed
	Cich	Cich-Chr4:25034851	Cich4g04628	Cich-Chr4:133603174	transposed
	Cich	Cich-Chr5:9037486	Cich4g04628	Cich-Chr4:133603174	transposed
	Cich	Cich-Chr1:37682281	Cich4g04628	Cich-Chr4:133603174	wgd
	Cich	Cich-Chr4:133603174	Cich7g00667	Cich-Chr7:20724311	wgd