Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04652 | ATGGAGGGTATTGATGCTAACGATAAGTACGCTAAAGAATTAGAAGTAGGCGTTAGAGTTGTACAGCTTGCTTGTTATCTATGCCAAAAGGTGCAAAAGGGTTCGATTGGTCCGACCCCTGATCAGGTCTTCTCTAAAGACGACGATTCACCGGTTACCGTCGCCGATTGGAGTGTACAAGCAATGATTAGCTGGATTCTATCAGAATCATTTGGTAAACAAAATGTCTCAATTGTAGCTGAAGAAGACACACAAACACTATCCGATTCAAACAGCACCCACTTACTATCATCTGTTATTTCAACCGTGAACGATAGTTTAGCCATGGCACCCCGGTTCGGTCTCAAGGGTCCAACCGCACCCCTCGGCCCCACACAAGTTCTTGAAGCCATTAACCACTGCAATTCAACCGGTGGTCCAATGGGAAAGCACTGGGTCCTTGACCCTGTTGATGGGACATTAGGGTTTGTTCGTGGTGACCAGTACGCTGTTGCTCTTGCTTTGATTGAAAACGGGCAGGTTGTGGTCGGTGTTCTTGGCTGCCCGAATTATTCGAGTAAGAAGAAATTGGTGAATAATAGTGTGAGTAAATCGGATTTGTGGCAAGAAGGGTGTGTGATGTATGCGAGAAAAGGTAGCGGTCAAGCTTGGATGCAGCCATTGGTGAACGGTGGTGGGTCCCTTGTGTGGCCCAATTCAGCTAGCCGGATTCGGGTTTCTTCAATTGATGATCCTTCAATGGCTACGTTTTGTGAACCGGTTGAAAAAGCCAACTCTAACCATTCTTATAGTGCGGGAATTGCTTACAGTTTAGGACTTCGAAAGAAACCATTGCGGGTGTATAGCATGGTAAAATACGCAGCAATAGCACGTGGAGATGCAGAAATATATATGAAATTTGCAAAAGCCGGATATAAAGAAAAGATATGGGACCATGCTGCCGGGGTGGTGATAGTGGAAGAAGCCGGCGGTGTTGTGACGGATGCTGGTGGCCGGCCGCTTGATTTTTCAAGAGGGGTGTATCTTGAAGGGCTTGACCGGGGAATTGTTATTTGTTCAGGGGTGAATTTGCATGATAAAATTATAGGGGCTGTTTATGCAAGTTGGGATTCTTCTCATCTATAG | 1125 | 45.96 | MEGIDANDKYAKELEVGVRVVQLACYLCQKVQKGSIGPTPDQVFSKDDDSPVTVADWSVQAMISWILSESFGKQNVSIVAEEDTQTLSDSNSTHLLSSVISTVNDSLAMAPRFGLKGPTAPLGPTQVLEAINHCNSTGGPMGKHWVLDPVDGTLGFVRGDQYAVALALIENGQVVVGVLGCPNYSSKKKLVNNSVSKSDLWQEGCVMYARKGSGQAWMQPLVNGGGSLVWPNSASRIRVSSIDDPSMATFCEPVEKANSNHSYSAGIAYSLGLRKKPLRVYSMVKYAAIARGDAEIYMKFAKAGYKEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSRGVYLEGLDRGIVICSGVNLHDKIIGAVYASWDSSHL | 374 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04652 | 374 | NCBIfam | 3'(2'),5'-bisphosphate nucleotidase | 10 | 372 | IPR006239 | GO:0006790(InterPro)|GO:0008441(InterPro) | |
| Cich4g04652 | 374 | ProSitePatterns | Inositol monophosphatase family signature 2. | 310 | 324 | IPR020550 | GO:0046854(InterPro) | |
| Cich4g04652 | 374 | Pfam | Inositol monophosphatase family | 48 | 365 | IPR000760 | - | |
| Cich4g04652 | 374 | FunFam | PAP-specific phosphatase HAL2-like | 238 | 371 | - | - | |
| Cich4g04652 | 374 | ProSitePatterns | Inositol monophosphatase family signature 1. | 145 | 158 | IPR020583 | - | |
| Cich4g04652 | 374 | PANTHER | PHOSPHATASE | 6 | 370 | IPR051090 | GO:0000103(PANTHER)|GO:0008441(PANTHER)|GO:0042578(PANTHER) | |
| Cich4g04652 | 374 | Gene3D | - | 9 | 225 | - | - | |
| Cich4g04652 | 374 | SUPERFAMILY | Carbohydrate phosphatase | 10 | 367 | - | - | |
| Cich4g04652 | 374 | CDD | PAP-phosphatase | 13 | 367 | - | - | |
| Cich4g04652 | 374 | Gene3D | - | 238 | 368 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04652 | K01082 | 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr3:31785892 | Cich4g04652 | Cich-Chr4:134076205 | dispersed | |
| Cich | Cich-Chr3:31017890 | Cich4g04652 | Cich-Chr4:134076205 | wgd |