Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cich4g04655	ATGGAAACTCCGGCTTCCAAGAGGTCGTTGAGAAAGAAACCCCTCTCCAGAAGCTACGATGAGCATTTGATGGATGACTATTTGGATAAACAAATAGGTGGCTCTCCAAGGAAACGGTTTAGAACAAAGAAGGAACTGGAAAAAGAAACAGAAAAAGAAGCCATGATAGCCCTTTCTCTAGGGTTTCCCATTGATGCACTCCTTGAAGAAGAAATCAAAGCCAATGTAGTAAGTGAGTTACATGGAAAAGAACAAAACGACTACATAGTAGTCAGAAACCACATACTTTCAAGATGGAGAGCTAATGTACACACATGGCTTTCCAAAGGAGAAATAAAAGAAACCGTAAGTAACGAATTCAACCACTTACTCCATTCAGCTTATGACTTTCTTCTCTTCAATGGCTATATAAACTTTGGAGTTTCACCATCTTTCAAAGCTCAAATGCCCGAAGAACCAACCGAAAAATCGGTAATAATAATCGGTGCAGGACTCGCTGGTTTAGCTGCAGCTCGCCAGCTGTTAGCTTTTGGTTTTAAAGTAATTGTCTTAGAGGGTAGAAACAGACCCGGGGGTAGAGTTTACACCCAAAAGATGTCTCACGGTTGTACGGGTCAGGGGCAAAATGGTAATTACGCTGTGGTGGATCTTGGTGGAAGTGTTATCACAGGTATACACGCGAACCCTTTAGGAGTTTTAGCTAGACAGCTTTCTATCCCTCTTCATAAAGTTAGAGATAAATGTCCTTTATATGATCCAGAAGGTAAACCAGTAAGTAAAGAAACCGATTCGAAAGTTGAATTTATTTTTAATCGCCTTCTAGATAAAGTGACAGAATTCAGACAAATAACGGGAAAATCATGTGGCGATATTTCACTAGGGTCACTTCTTGATAAACTTAGAAAGTTATATTCAGTAGCCACAAATGTAGAAGAAAAACAATTACTCGATTGGCATTTTGCAAATTTAGAATACGCAAACGCGGGCCCGCTTTCGGATCTTTCAGCTGCTTATTGGGATCAAGATGACCCGTACGAAATGGGAGGTGATCATTGCTTTTTAGCAGGTGGGAATTGGAGGTTAATTGAATCTTTATGTGAAGGGCTTCCGATTTTTTATGAAAAGATTGTTGAAACGGTTAAATATAATGAAAATGGTGTTGAGGTAATTGCGGGTGGGCAATCTTTTCAAGGGGATATTGTTTTGTGTACGGTCCCACTTGGTGTTTTGAAGAAAAAGGTTGTGAATTTTGTTCCTGAATTACCTGAAAGAAAAGTTGATGCGATTGAAAGATTGGGATTTGGGTTGTTGAATAAGGTTGCTATGGTGTTTCCTTTTGTGTTTTGGGGGGAAGATGTTGATACGTTTGGGTGTTTGAATAAGGAAAGTGGGACCCGCGGGGAGTTTTTTTTGTTTTATAGTTATCATACGGTTTCTGGTGGTTCGGTTCTTGTTGCTTTGGTGGCTGGTGAAGCTGCAAAAACATTTGAATCTACACATCCTTCCACTTTGCTTCATCGTGTTTTAAATGTTCTTAAAGGTATATACGGTCCAAAGGGAATTGAAGTACCAAATCCAATCCAAACCATTTGTACAAAATGGGGAAATGATCCCCTGTCCTACGGTTCATACTCCCATGTACGCGTCCACTCTTCCGGAAGCGACTACGATATTCTCGCGGAAAATGTCAATAACCGTCTTTTTTTCGCCGGTGAAGCCACCAACCGCCAACACCCCGCCACCATGCACGGGGCCTACTTAAGTGGTCTAAGAGAAGCTTCATGTATCTATAGACTCACAAAGGCTAATAACAATCAGAATAATAATAACAACAATAATAATAATATTAAACAAAGTAATCCCAAAAAAAGCATCCGAAAAATCATTGGCGTTAGTGATACTCTCGTAAATCTTTTCAAGTACCCGGATTTATCTTTCGGGAACTTACTTTTCGTGTTCGATCCTTCAAATGAAGATAGTGAGTCAACCGGGCTCATGATGGTTGCCATTGATAAGTTTAGTGAGTTATGTGGTGATGATAATGGGAAGGTCAACGCGGGTCAAAGTCAAAGTCAATGGTTGGGTAAGGGAGCGGTGAAGCTTTACACGGTTGTGACACGTGGACAAGCGCGGGAGTTGGAGGCGGTGGCTGGTGGCGGTGAAAGGCGGTTGAGTTATATGTCGGAGAATCTTGGGTTGAAGTTAATGGGAATGGACTGTTTTGCCCTCGTGGCGAATTCGTTGATTTCGTATATTGCTACGCGAAGAGGGCGGGTTAGGAATCGGGTGGTTTTTGGGAACCGTGTTTCGTACACGTGA	2319	41.44	METPASKRSLRKKPLSRSYDEHLMDDYLDKQIGGSPRKRFRTKKELEKETEKEAMIALSLGFPIDALLEEEIKANVVSELHGKEQNDYIVVRNHILSRWRANVHTWLSKGEIKETVSNEFNHLLHSAYDFLLFNGYINFGVSPSFKAQMPEEPTEKSVIIIGAGLAGLAAARQLLAFGFKVIVLEGRNRPGGRVYTQKMSHGCTGQGQNGNYAVVDLGGSVITGIHANPLGVLARQLSIPLHKVRDKCPLYDPEGKPVSKETDSKVEFIFNRLLDKVTEFRQITGKSCGDISLGSLLDKLRKLYSVATNVEEKQLLDWHFANLEYANAGPLSDLSAAYWDQDDPYEMGGDHCFLAGGNWRLIESLCEGLPIFYEKIVETVKYNENGVEVIAGGQSFQGDIVLCTVPLGVLKKKVVNFVPELPERKVDAIERLGFGLLNKVAMVFPFVFWGEDVDTFGCLNKESGTRGEFFLFYSYHTVSGGSVLVALVAGEAAKTFESTHPSTLLHRVLNVLKGIYGPKGIEVPNPIQTICTKWGNDPLSYGSYSHVRVHSSGSDYDILAENVNNRLFFAGEATNRQHPATMHGAYLSGLREASCIYRLTKANNNQNNNNNNNNNIKQSNPKKSIRKIIGVSDTLVNLFKYPDLSFGNLLFVFDPSNEDSESTGLMMVAIDKFSELCGDDNGKVNAGQSQSQWLGKGAVKLYTVVTRGQARELEAVAGGGERRLSYMSENLGLKLMGMDCFALVANSLISYIATRRGRVRNRVVFGNRVSYT	772

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cich4g04655	772	Gene3D	-	247	552	-	-
	Cich4g04655	772	PANTHER	FLAVIN MONOAMINE OXIDASE	62	598	IPR050281	GO:0016491(PANTHER)
	Cich4g04655	772	Pfam	SWIRM domain	68	139	IPR007526	GO:0005515(InterPro)
	Cich4g04655	772	Gene3D	-	52	151	IPR036388	-
	Cich4g04655	772	SUPERFAMILY	FAD-NAD(P)-binding domain	149	598	IPR036188	-
	Cich4g04655	772	SUPERFAMILY	Homeodomain-like	49	152	IPR009057	-
	Cich4g04655	772	ProSiteProfiles	SWIRM domain profile.	47	148	IPR007526	GO:0005515(InterPro)
	Cich4g04655	772	FunFam	Lysine-specific histone demethylase 1A	52	152	-	-
	Cich4g04655	772	SUPERFAMILY	FAD-linked reductases, C-terminal domain	433	545	-	-
	Cich4g04655	772	Pfam	Flavin containing amine oxidoreductase	165	596	IPR002937	GO:0016491(InterPro)
	Cich4g04655	772	Gene3D	-	158	594	IPR036188	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cich4g04655	K11450	[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:1.14.99.66]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cich	Cich-Chr1:45811533	Cich4g04655	Cich-Chr4:134103214	dispersed
	Cich	Cich-Chr3:70393644	Cich4g04655	Cich-Chr4:134103214	dispersed
	Cich	Cich-Chr4:134103214	Cich7g00157	Cich-Chr7:4777642	dispersed
	Cich	Cich-Chr4:134103214	Cich3g00663	Cich-Chr3:13199285	transposed
	Cich	Cich-Chr4:134103214	Cich7g03350	Cich-Chr7:106421198	transposed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Cich	Amino_oxidase	9.9e-90	CL0063		TR	SWI/SNF-SWI3