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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04658 ATGGCCCCGATCTATGCTGTTGACTCATACGTCGGATTGCTTGATATTCGTGGCAGTGAGACCTTCTTTGTGTTCCTGGACTCCATCAAAGAATGCTACGAGGGTCTGGTGATGGCCAAGTTCTTGGCTTTGCTCTACACTTATTTGAATATATCCATAAGCAAGAACATAGTTCCAGATGAGATCAAAGGAAGAGAAATTCATCACTCATTCCCAATGACTCTCTTCCAACCTCATTCGGTTCGTTTGAACCATCAAAACTTGAAGCTGTTGAAATATTGGACATGGCAGTTTGTAGTGATTCGCCCTGTTTGTTCTGTTTTGATGATAGTTCTTCAACTTCTTGAGATATATCCTGATTGGCTGAGCTTGACATTTACTATGATCTTGAATGTTTCGGTTTCCTTAGCCTTATATGCCCTTGTGGTTTTCTACCATGTATTTGCTAAAGAATTGGCCCCACATAAACCTCTTGCCAAGTTCTTATGTGTCAAAGGGATCGTCTTCTTTTGCTTTTGGCAGGGAATTGTACTTAGTGGTCTAGTGGCAATGGGCATAATTAAATCGAATCATTTTTGGCTTGATGTGGCGCATATCCAGCAAGCTCTTCAAAACGCATTGGTGATTGTGGAGATGGTGTTTTTTGCAATGTTTCAGATGTATGCATACACTGCTGCACCATACAAGGTCGATCATTTGAAAGAAAAGAAGAAAGAGTGA 720 40.83 MAPIYAVDSYVGLLDIRGSETFFVFLDSIKECYEGLVMAKFLALLYTYLNISISKNIVPDEIKGREIHHSFPMTLFQPHSVRLNHQNLKLLKYWTWQFVVIRPVCSVLMIVLQLLEIYPDWLSLTFTMILNVSVSLALYALVVFYHVFAKELAPHKPLAKFLCVKGIVFFCFWQGIVLSGLVAMGIIKSNHFWLDVAHIQQALQNALVIVEMVFFAMFQMYAYTAAPYKVDHLKEKKKE 239
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04658 239 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 1 231 IPR005178 GO:0005215(PANTHER)|GO:0006810(PANTHER)|GO:0016021(PANTHER)
Cich4g04658 239 SMART Solute-trans-a-2 1 228 IPR005178 -
Cich4g04658 239 Pfam Organic solute transporter Ostalpha 1 228 IPR005178 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04658 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:134119506 Cich5g04261 Cich-Chr5:121029329 dispersed