AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04673 ATGGCACCTGGTCTGTTCGCCTGCTTTCGAAAACGCTCCTCCTCCACCTCTTCTTTAGATATCAACAAATCAACTGCAACAAACGACGCCGCCACGGCTGACATCACAGCGGAGGAGTTAAAAAGAGGAGGACCGGTGGTGGTGGAGCTATTCTCTTCCCAAGGATGCGCCACATCGCCGGAGGCGGAGCTTCTGTTCTCGAGGTTAGGAAGGGGAGACTTTAAATTGGAAGTTCCTGTGATATTAATGGCATACCATGTCGATTACTGGGATTATAACGGATGGAAGGATCCGTTTGCGTCGAGTCAATGGACGGTGAGGCAAAAGGAGTATGTGGAGTCGTTGAATCTGGACACCATGTTTACGCCGCAGGTGGTGGTTCAGGGGAGGAGTCAGTGCATCGGAAACGACGAAGATGGGCTAATCGCCGCCATCACCTCTGCATCCAGATACCCTCCTCCGGCGTTCCAGGCAACATTCGAGAGGCCTACACCGGAATCCTTGCAAGTCACCCTGAAAGGAGCGTTACGGGTCAAAATAGACGGCGGAGCAGACATAATGGTGGCTCTCTACGAGAGCAGTCTAGTGACCAACTGCCGGAACGGCGACAACAAAGACCTAGTTCTTGCCAACGATTTCGTCGTTAGAAAGCTCGCAAAGCTCTACTCCGGCAACAACATCCCGTCAAAGAAGACAATTACCGGAACCCTCGATTTTGGGCTTTGGGAAGGATTCAACAGCACGAAATGTGGTATCGTAATGTTCGTGCAGCAACATGGATCTCGTCATATTTTTGGTTCTCAACGAATTCAACTCCCTGCTAATCTCTGA 831 50.9 MAPGLFACFRKRSSSTSSLDINKSTATNDAATADITAEELKRGGPVVVELFSSQGCATSPEAELLFSRLGRGDFKLEVPVILMAYHVDYWDYNGWKDPFASSQWTVRQKEYVESLNLDTMFTPQVVVQGRSQCIGNDEDGLIAAITSASRYPPPAFQATFERPTPESLQVTLKGALRVKIDGGADIMVALYESSLVTNCRNGDNKDLVLANDFVVRKLAKLYSGNNIPSKKTITGTLDFGLWEGFNSTKCGIVMFVQQHGSRHIFGSQRIQLPANL 276
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04673 276 PANTHER - 1 276 IPR010634 -
Cich4g04673 276 Pfam Protein of unknown function (DUF1223) 47 257 IPR010634 -
Cich4g04673 276 Gene3D Immunoglobulins 155 273 IPR013783 -
Cich4g04673 276 SUPERFAMILY Thioredoxin-like 43 272 IPR036249 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04673 - -