AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04680 ATGAAGTCAAATTATTTAAATATAGAGGTTGGGGGTGGTGGGAGTTGGGGGATTTGTAAAGAAGGGAAGACGAAGAGCGGCAATTTCGCCCACTCTTGCTCTTGTACTTTGATTTCTCATCAACGATTTCTCTCTCCGGTTCTTTCCCTAAATACATGCAACCCTAACAATTCGATCGATTCGACTCTGTCTCCCTCTCCCTCTCTTTCTCTCTCTCTCTCTAGCGCTATGGCGGATGATAAGAGAAAGAAGAAGAGAGGGAGAAGCAAGGTTTTCAGGTCTTGCTTTCGGTCTCTTACCACCGACGAAGCGAGTTCATCTGGTAAATCAGATTGTCTGGATACCAAAAACGGACGGGTAGGAAAGGTAGCAGAAAGTGGTCGAACAGGGAAAGACTTCTTTCAGGATGGCAAGTTGGTCAACGGTGGCGTCGCCGACAGCGGCGGTGATTGCTATGCGAAACGTCCTCCTCGCCGCCGACGATTCTCTCGTATACTTAAAGCCGTTTTGTTTGATTCGATGATGGCGAAGAAGATTCGAAGAAATTCTTCCAAATCATCGATTGCTTCAGATACGAGCGTGTCGTCATCCTCATCAAGCGAGAAAATCGGCAAGTCATTCGACTGCAGCAATGCGTGCGGCAAGGAATGTACAGATATGGATGATTCTCGTAGTCATTCAAATTTATTCTCGTCTTCTTCCCGCACCACTCTTTCCTCGGCCTCTACTTCCTCCTCCTCGTCCATGAACTCTAATTCTCGGTGGCCTTCTGACCAAAAACCATCATCAGTCGATATTAGACAACCTGTTCCATCAAATTCGTCAATCTCTAAAAAACCAAATTCAAACAACTCTAGTTCTCGATCATGCTTTGACCAAAAACTATCATCCGGAACAGATGCACTCCATCTGAGACGTCAGGATTCTTCCATTTCTCTACCATTAGCGAAACAAAAACCTATCAAATCCATTCCTAAATCGTCTTCATATCAGAAAGGATTATCCCGAGTAGGTTCGAGAACTTCAGTGTCATCAAATCCACCTTCCGTTACAAAAACCAATTCCGATAAGATCAAATCCGGCGGCAAAAATATAAGTACCCGTTGGTGTTTATTTCTTCTCCTAAGCCTCGTTGTGTTGGTGATTTGGGGGCGACTTTTCTCAATCCTCTGTACGTCAATTTCGTTCTACTTTGTACCTTGCCGCCGGCTAAAACGAGTCAACTCAGTAACCAACTCGGCCGAGTTTCTTGATTTTGACTCGGATCAATACAAGAAAAGAGTAATTATGGCTGGACTGCTTGAAAGGACTCGTAATCCAATCCGGTAG 1329 44.7 MKSNYLNIEVGGGGSWGICKEGKTKSGNFAHSCSCTLISHQRFLSPVLSLNTCNPNNSIDSTLSPSPSLSLSLSSAMADDKRKKKRGRSKVFRSCFRSLTTDEASSSGKSDCLDTKNGRVGKVAESGRTGKDFFQDGKLVNGGVADSGGDCYAKRPPRRRRFSRILKAVLFDSMMAKKIRRNSSKSSIASDTSVSSSSSSEKIGKSFDCSNACGKECTDMDDSRSHSNLFSSSSRTTLSSASTSSSSSMNSNSRWPSDQKPSSVDIRQPVPSNSSISKKPNSNNSSSRSCFDQKLSSGTDALHLRRQDSSISLPLAKQKPIKSIPKSSSYQKGLSRVGSRTSVSSNPPSVTKTNSDKIKSGGKNISTRWCLFLLLSLVVLVIWGRLFSILCTSISFYFVPCRRLKRVNSVTNSAEFLDFDSDQYKKRVIMAGLLERTRNPIR 442
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04680 442 MobiDBLite consensus disorder prediction 180 205 - -
Cich4g04680 442 PANTHER OS07G0553800 PROTEIN 77 439 IPR040411 -
Cich4g04680 442 MobiDBLite consensus disorder prediction 315 359 - -
Cich4g04680 442 MobiDBLite consensus disorder prediction 224 293 - -
Cich4g04680 442 MobiDBLite consensus disorder prediction 220 293 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04680 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:134457271 Cich8g00400 Cich-Chr8:9731137 dispersed
Cich Cich-Chr4:134457271 Cich8g00100 Cich-Chr8:3180690 transposed