Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04682 | ATGCAACCCCAGAAAACCCTACCGGAATCTGACTTACCATCTCTCGCCGCCATCAAAGTCAAGTCATCATCCCCTCGTTTCCGTCCTACGAATCCTTCCGCCACAGAAACCCCCACCGCCGGCGCGCAGCGCAAGATAGGCATCGCCGTCGATCTTAGTGACGAGAGCGCCTTTGCTGTGAAGTGGGCTGTTCACCAGTATCTCCGCCCCGGTGACGCCGTGATCCTCATCCACGTCCGTCCTACTTCCGTCCTTTACGGCGCTGATTGGGGCTCTGTTGATCTTTCCATCGTCGACACCGACAATGAGGAATCACAGCGGAAGCTCGAAGATGATTTCGATGCTTTCACTACTACGAAATCCGCTGCCCTAGCGCAACCTCTAGTCGACGCGCACATACCTTACAAGATCCATATCGTCAAAGACCATGATATGAAGGAGAGGCTGTGTTTGGAAGTCGAGAGGCTAGGGTTATGTGCTGTTATCATGGGAAGCCGAGGATTCGGTGCTACGAAACGCGGAAGCGATGGAAGGCTCGGGAGTGTTAGCGATTACTGTGTGCGTCACTGTGTGTGCCCCGTGGTAGTTGTGAGATATCCCGATGAGAAAGATCCCTCTGCCGCTGAGCCGATTGTTTCGGTGGCAAGAGCCGACGATGAAGAAGACGATCCTGAATTCCATGATGCAACCGATGAACGAAAATGTTAG | 708 | 53.53 | MQPQKTLPESDLPSLAAIKVKSSSPRFRPTNPSATETPTAGAQRKIGIAVDLSDESAFAVKWAVHQYLRPGDAVILIHVRPTSVLYGADWGSVDLSIVDTDNEESQRKLEDDFDAFTTTKSAALAQPLVDAHIPYKIHIVKDHDMKERLCLEVERLGLCAVIMGSRGFGATKRGSDGRLGSVSDYCVRHCVCPVVVVRYPDEKDPSAAEPIVSVARADDEEDDPEFHDATDERKC | 235 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04682 | 235 | MobiDBLite | consensus disorder prediction | 204 | 235 | - | - | |
| Cich4g04682 | 235 | CDD | USP-Like | 45 | 197 | - | - | |
| Cich4g04682 | 235 | PANTHER | OS01G0783500 PROTEIN | 8 | 234 | IPR044162 | - | |
| Cich4g04682 | 235 | Gene3D | HUPs | 33 | 210 | IPR014729 | - | |
| Cich4g04682 | 235 | Pfam | Universal stress protein family | 44 | 198 | IPR006016 | - | |
| Cich4g04682 | 235 | MobiDBLite | consensus disorder prediction | 24 | 40 | - | - | |
| Cich4g04682 | 235 | PRINTS | Universal stress protein signature | 43 | 61 | IPR006015 | - | |
| Cich4g04682 | 235 | PRINTS | Universal stress protein signature | 176 | 198 | IPR006015 | - | |
| Cich4g04682 | 235 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Cich4g04682 | 235 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 44 | 202 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04682 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr2:111107267 | Cich4g04682 | Cich-Chr4:134494897 | dispersed | |
| Cich | Cich-Chr3:154732546 | Cich4g04682 | Cich-Chr4:134494897 | dispersed | |
| Cich | Cich-Chr4:134494897 | Cich7g02623 | Cich-Chr7:94263301 | dispersed | |
| Cich | Cich-Chr4:134494897 | Cich3g02118 | Cich-Chr3:40260000 | transposed |